Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181274g00019 ATGGAAGTGGAACACCCAGCAGCAGCAGCAGAGTCCAACAATGGAAACCAGTCACAAGAACAAAAATTCAGTGTCCCTGTGGATTCAGAGAACAAGGCAACAGAATTCAGACTCTTGTCAATATCCAAACCACACATGAGAGCATTCCACCTCTCATGGATCTCCTTCTTCTCATGCTTTGTCTCCAGCTTTGCAGCACCACCACTCCTCCCCATCATCCGCGACAACCTCAACCTCACCGCAACTGACATCGGCAATGCCGGAGTCGCCTCCGTCTCCGGCGCTGTCTTCGCAAGAGTAGCCATGGGGACAGCCTGCGACTTGGTCGGCCCTCGCCTCGCCTCCGCCTCCCTCATCCTCCTAACAGCACCAGCAGTGTACTTCACCTCAGTCATCAACTCAGCCACCTCCTACCTCCTTGTCCGATTCTTCACCGGATTCTCCTTAGCTACCTTCGTCTCCACGCAATTCTGGATGAGTTCCATGTTCTCTCCCCCTGTTGTAGGCAGAGCAAACGGATTCTCCGGCGGATGGGGGAACCTTGGGGGAGGGGCAACCCAACTAATCATGCCATTAGTCTTTTCTCTCATTCGAGACATCGGCGCCGCGCAATTCACGGCTTGGAGGATCGCCTTCTTTGTCCCTGCATTCTTCCAGATGCTAACAGCATTCTCCATATTGATATTTGGACAGGACATGCCGGATGGAAACTTTCAAAGGCTAAAGAAGGCAGGGGAGAAACCAAAAGATGAATTCTCAAAGGTTCTTTTCCATGGTGTTTCAAACTATAGAGGCTGGATTCTAGCGTTGACTTATGGATACTGCTTTGGTGTGGAGTTGACTATTGATAACATCATAGCTGAGTACTTCTATGACAGATTCAATCTCAAGCTGCACACTGCTGGGATCATTGCTGCGAGTTTCGGGTTGGCGAATCTGTTCTCTAGGCCTGGTGGAGGCATAGTATCTGATGCAGTTTCAAAGAGGTTTGGAATGAGGGGTAGGCTTTGGGCCTTGTGGCTTTGCCAAACATTCGCTGGTGTCTTGTGCATAATTCTTGGACTTGTTGGATCTTTGAGTGTTTCTGTTGTTGTTATGATCATATTCTCTGTGTTTGTTCAAGCTGCTTGTGGCATGACCTTTGGAATTGTTCCTTTTGTCTCAAGAAGGTCACTAGGAGTGATATCTGGAATGACAGGAGGAGGAGGGAACGTGGGTGCAGTAGTGACCCAACTGATATTCTTCAAAGGATCAAGATTCTCAAAAGAGAGGGGAATCACACTAATGGGTGTGATGATCATTATATGCACCCTTCCAATATGTCTAATATATTTCCCACAGTGGGGAGGCATGTTCTTTGGTCCATCATCAGAGAAAGTTACAGAAGAAGATTATTACTTGGGTGAGTGGAACTCAAAGGAGCAAGAGAAAGGCTCACACCATGCAAGCTTGAAGTTTGCTGATAATAGTGTTAGTGAGAGAGGCAGAAGACTCAACGCTTCAACTAGGCCTGCTGATGAATCAACACCAACACATGTTTGA 1542 0.4786 MEVEHPAAAAESNNGNQSQEQKFSVPVDSENKATEFRLLSISKPHMRAFHLSWISFFSCFVSSFAAPPLLPIIRDNLNLTATDIGNAGVASVSGAVFARVAMGTACDLVGPRLASASLILLTAPAVYFTSVINSATSYLLVRFFTGFSLATFVSTQFWMSSMFSPPVVGRANGFSGGWGNLGGGATQLIMPLVFSLIRDIGAAQFTAWRIAFFVPAFFQMLTAFSILIFGQDMPDGNFQRLKKAGEKPKDEFSKVLFHGVSNYRGWILALTYGYCFGVELTIDNIIAEYFYDRFNLKLHTAGIIAASFGLANLFSRPGGGIVSDAVSKRFGMRGRLWALWLCQTFAGVLCIILGLVGSLSVSVVVMIIFSVFVQAACGMTFGIVPFVSRRSLGVISGMTGGGGNVGAVVTQLIFFKGSRFSKERGITLMGVMIIICTLPICLIYFPQWGGMFFGPSSEKVTEEDYYLGEWNSKEQEKGSHHASLKFADNSVSERGRRLNASTRPADESTPTHV 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181274g00019 513 PANTHER HIGH-AFFINITY NITRATE TRANSPORTER 2.3 11 497 IPR044772 GO:0015112
Stsc181274g00019 513 MobiDBLite consensus disorder prediction 10 27 - -
Stsc181274g00019 513 Pfam Major Facilitator Superfamily 53 409 IPR011701 GO:0022857|GO:0055085
Stsc181274g00019 513 MobiDBLite consensus disorder prediction 1 27 - -
Stsc181274g00019 513 FunFam Nitrate transporter 2.1 249 450 - -
Stsc181274g00019 513 ProSiteProfiles Major facilitator superfamily (MFS) profile. 48 448 IPR020846 GO:0022857
Stsc181274g00019 513 MobiDBLite consensus disorder prediction 494 513 - -
Stsc181274g00019 513 Gene3D MFS general substrate transporter like domains 40 239 IPR036259 -
Stsc181274g00019 513 MobiDBLite consensus disorder prediction 474 513 - -
Stsc181274g00019 513 SUPERFAMILY MFS general substrate transporter 36 444 IPR036259 -
Stsc181274g00019 513 CDD MFS_NRT2_like 49 442 IPR044772 GO:0015112
Stsc181274g00019 513 FunFam High affinity nitrate transporter 2.5 41 237 - -
Stsc181274g00019 513 Gene3D MFS general substrate transporter like domains 249 449 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181274g00019 Stsc-Chr181274 102060 104133 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181274g00019 1 496 Inorganic Solute Cotransporters AT1G12940 72.379 0.0 762
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181274g00019 K02575 - gmx:100787888 856.67