Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181272g00023 ATGGCTCTGAGTTGGCCGCTCCTATTACGGTTCCGTTCTCAACAAACTCTGCTCGCTCCAACTAACTTTGCCACCTACTCCGATCTTGCCGAACCGCGTGCTTTTGATGCTCCGTGTGTTGCTTCCTTTAATCCACTGCACCGGAGCAATGTTTTGGCTCCGGCACTGAAACTGAAGGTTCTGGCGCCGTACGTCGTCAAATGCCTCGCCAGATCCACAGAGGAGAAGCAATGGAGCGACGCCGAAACAGTCGTCTCTGATTCCGACGAAGCTGCTTCTGAGGACGACGGAAACGGTCAGCTTCCGAGTCAAACCTCTGCTGCTTCGGAAACTGATCGTGTTGTGTCTCCGAGAGTTGCGACTACCTACTCCGGCGACTCTCTTTCGCTCGGAATTCGAGAACCGGTTTACGAAGTTGTGGAAGTGAGATCAGATGGAACAGTATCGACAAGAAAAATCAACAGGAGACAATTGTTGAAATCAAGTGGTCTTCGTCCTCGGGACATTCGAAGTGTGGATCCGTCTTTGTTTTTGACGAATTCGATGCCCTCTTTGCTGGTTCGTGAGTATGCGATACTTCTAAATCTTGGTTCACTTCGAGCAATAGCAATGAAAGATTGTGTACTTATATTTGACTACAATCGTAAAGGAGGGCAAGCTTTTCTGGAGTCATTGTTGCCCAGGTTGAACCCCAAGAACAATAATGGAGGGCCATCAATGCCGTTTGAACTTGAGGTTGTTGAAGCAGCATTGCTTTCAAGAATACAGCGTTTAGAGCGCAGACTGATGGACTTAGAACCTCGAGTTCAAGCTCTTCTTGAAGCCTTGCCAAATCGATTAACAGGTGACATATTGGAGCAACTTCGTATTAGCAAACAAACTTTGGTTGAGTTAGGTTCTAGGGCTGGCGCTCTTAGACAGATGCTGCTCGACCTTTTGGAAGATCCCCATGAAATACGGCGTATATGTATTATGGGAAGAAACTGCACGCTTACAAAAGGGAACAATTTGGTCGAATGCTCTCTGCCCTTAGAGAAGCAGATTGCAGAAGAGGAGGAGGAGGAAATTGAGATGCTTCTCGAAAATTATCTTCAAAGATGTGAATCTTGTCATGGTCAAGCTGAAAGGCTTCTTGATTCTGCAAGGGAAATGGAAGATTCTATAGCAGTCAGTTTGAGCTCACGAAGGCTTGAGGTTAGCCGAGTGGAACTGCTTCTCCAAGTGGGAACATTCTGTGTGGCAGTTGGTGCACTTGTAGCAGGTATATTTGGCATGAACCTGAAGTCATATCTTGAAGAACATGTGTTTGCATTTTGGCTGACAACAGCTGGAATAATTGTTGGTGCCGTTGTGGCTTTTTTCCTTATGTATTACTACCTTAAGGCAAGGAAAATATTTTGA 1401 0.4611 MALSWPLLLRFRSQQTLLAPTNFATYSDLAEPRAFDAPCVASFNPLHRSNVLAPALKLKVLAPYVVKCLARSTEEKQWSDAETVVSDSDEAASEDDGNGQLPSQTSAASETDRVVSPRVATTYSGDSLSLGIREPVYEVVEVRSDGTVSTRKINRRQLLKSSGLRPRDIRSVDPSLFLTNSMPSLLVREYAILLNLGSLRAIAMKDCVLIFDYNRKGGQAFLESLLPRLNPKNNNGGPSMPFELEVVEAALLSRIQRLERRLMDLEPRVQALLEALPNRLTGDILEQLRISKQTLVELGSRAGALRQMLLDLLEDPHEIRRICIMGRNCTLTKGNNLVECSLPLEKQIAEEEEEEIEMLLENYLQRCESCHGQAERLLDSAREMEDSIAVSLSSRRLEVSRVELLLQVGTFCVAVGALVAGIFGMNLKSYLEEHVFAFWLTTAGIIVGAVVAFFLMYYYLKARKIF 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181272g00023 466 MobiDBLite consensus disorder prediction 79 116 - -
Stsc181272g00023 466 MobiDBLite consensus disorder prediction 97 116 - -
Stsc181272g00023 466 Coils Coil 255 275 - -
Stsc181272g00023 466 FunFam Magnesium transporter MRS2-11, chloroplastic 215 397 - -
Stsc181272g00023 466 Coils Coil 346 366 - -
Stsc181272g00023 466 Gene3D - 132 213 - -
Stsc181272g00023 466 SUPERFAMILY Magnesium transport protein CorA, transmembrane region 402 457 IPR045863 -
Stsc181272g00023 466 CDD Mrs2_Mfm1p-like 139 465 IPR039204 -
Stsc181272g00023 466 Gene3D Magnesium transport protein CorA, transmembrane region 214 392 - -
Stsc181272g00023 466 FunFam Magnesium transporter MRS2-11, chloroplastic 132 213 - -
Stsc181272g00023 466 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 108 465 IPR039204 -
Stsc181272g00023 466 Gene3D Magnesium transport protein CorA, transmembrane region 393 465 - -
Stsc181272g00023 466 Pfam CorA-like Mg2+ transporter protein 247 457 IPR002523 GO:0016020|GO:0030001|GO:0046873|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181272g00023 Stsc-Chr181272 154058 159027 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181272g00023 130 466 MRS2 Gene Family AT5G22830 84.570 0.0 558
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181272g00023 K16075 - gmx:100808371 676.011