Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181272g00006 ATGTTGTTCTTTATGGTTCCCTTGGCATTGGGTGATGATCTAAGGGTTGGTTTCTACAGTTCAAGCTGCCCAAAAGCAGAAGCCATTGTACGCAAAGTTGTTGAAAGGAACTACTTGTACATTGATAGCTCCATCGCTGGAGCCTTGCTTCGCTTGCACTTTCATGACTGTTTCGTTGGAGTAAGACAAAAATGTTGCGATGCCTCCATATTAATAGACTCAACAGAGGACAACCAATCTGAGAAAGACGCAGATGCAAACGAAACCGTAAGGGGTTTCGAGATCATCGACAAGGCCAAGAAGAAGTTAGAAAAAGTGTGCCCTTCAACAGTTTCATGTGCAGACATAATAGCCCTAGCAGCAAGAGACGCCGTCGCCATAACCGGAGGACCATGGTACGCCGTTCCCACCGGCCGCCGCGACGGCTTCGAATCAAATCCTTCCGACGCAGATATCCTGCCAGGGCCAAGCTCAACAGTGTCACACGCCCTTCAAATCTTCACATCAAAGGGCATGACACTTAGCGAAATGGTAACCCTAATGGGAGCACACACCATTGGTTCTGCTCATTGTGATTCTTTCCGGAAGAGGCTTGGAGGTAGAGACGCAACAATGGATCCTTCTCTGAATGAGAAGCTTGTGAGGATTTGTGAGAATAATAATAGTGATAATGATCGTACGGCGTTTTTGGATCAGAACACTTCTTTTGTGTTTGACAATGAGTTCTATAAGGAGGTTGTTAACAAGAGAGGGGTGCTCTTCATTGATCAGCAGTTGGGATTGGATGGTTTGAGTAAGGGGTTGGTGTCGAAGTTCGCCGGAGACGGTGAGAGCTTTCGGCGAAGCTTTGTGAATGCGATTGTGAAGATGGGAAGTATTGGTGTTTTGGTTGGAGATGATGGGGAGATTAGAACTCATTGCTGGGATTACAATGATGATTATTATGCATAA 951 0.4595 MLFFMVPLALGDDLRVGFYSSSCPKAEAIVRKVVERNYLYIDSSIAGALLRLHFHDCFVGVRQKCCDASILIDSTEDNQSEKDADANETVRGFEIIDKAKKKLEKVCPSTVSCADIIALAARDAVAITGGPWYAVPTGRRDGFESNPSDADILPGPSSTVSHALQIFTSKGMTLSEMVTLMGAHTIGSAHCDSFRKRLGGRDATMDPSLNEKLVRICENNNSDNDRTAFLDQNTSFVFDNEFYKEVVNKRGVLFIDQQLGLDGLSKGLVSKFAGDGESFRRSFVNAIVKMGSIGVLVGDDGEIRTHCWDYNDDYYA 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181272g00006 316 Gene3D Peroxidase, domain 2 154 290 - -
Stsc181272g00006 316 CDD secretory_peroxidase 14 307 IPR033905 GO:0004601|GO:0042744
Stsc181272g00006 316 PANTHER PEROXIDASE 25-RELATED 6 304 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc181272g00006 316 PRINTS Haem peroxidase superfamily signature 46 60 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc181272g00006 316 PRINTS Haem peroxidase superfamily signature 111 128 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc181272g00006 316 PRINTS Haem peroxidase superfamily signature 176 191 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc181272g00006 316 PRINTS Haem peroxidase superfamily signature 129 141 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc181272g00006 316 PRINTS Haem peroxidase superfamily signature 231 246 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc181272g00006 316 ProSitePatterns Peroxidases proximal heme-ligand signature. 176 186 IPR019793 -
Stsc181272g00006 316 ProSitePatterns Peroxidases active site signature. 46 57 IPR019794 GO:0004601
Stsc181272g00006 316 FunFam Peroxidase 154 290 - -
Stsc181272g00006 316 SUPERFAMILY Heme-dependent peroxidases 13 311 IPR010255 GO:0004601|GO:0006979|GO:0020037
Stsc181272g00006 316 Pfam Peroxidase 31 274 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc181272g00006 316 ProSiteProfiles Plant heme peroxidase family profile. 13 311 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc181272g00006 316 PRINTS Plant peroxidase signature 23 42 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc181272g00006 316 PRINTS Plant peroxidase signature 285 298 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc181272g00006 316 PRINTS Plant peroxidase signature 110 120 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc181272g00006 316 PRINTS Plant peroxidase signature 245 262 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc181272g00006 316 PRINTS Plant peroxidase signature 229 244 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc181272g00006 316 PRINTS Plant peroxidase signature 91 104 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc181272g00006 316 PRINTS Plant peroxidase signature 175 187 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc181272g00006 316 PRINTS Plant peroxidase signature 129 144 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc181272g00006 316 FunFam Peroxidase 17 159 - -
Stsc181272g00006 316 Gene3D - 18 307 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181272g00006 Stsc-Chr181272 30280 31757 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181272g00006 1 312 Peroxidase AT4G26010 51.757 1.56e-107 315
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181272g00006 K00430 - gmx:100820340 351.288