Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181270g00040 ATGAATCCAAAAATATCTGATTTTGGTATGGCTAGAATTGTTGCTGTGGATCAAAATGAAGAAAGCACGCATAGAATAGTCGGGACATATGGTTATATGTCTCCAGAATATGCAATGTTTGGACAATTCTCTGTGAAATCGGATGTGTTTAGTTTCGGAGTTATGGTTCTAGAGATTATTAACGGGAAGCAGAAAGGCAACAACTCTTCTGAATCAGAGTGCATTGATGACATTCGGAGACACGCTTGGGAAAAATGGAGAGAGAAATCGCCACTGGAACTACTGGATCCTAACATGGAAGGTCCTTATTCTAGAGAAGAAGTCATCAAATGCATCCACATTGGTTTGTTATGTGTTCAAGAAGAACCAAATGACAGACCTACGATGGCAACGATTGTTTTCTACCTAAATAGCCCTTCCCTCAACTTTCCATCCCCCCGTGAACCAGCATATTATTTCAAGCACAATAGAACAGTGGACAGCATCACAACCAGCAAGGAGTTGGTTAATGACAGTGATTCCATCAATGGAATCACCATAAGCAAATTCTTTCCTCGTTGA 561 0.4046 MNPKISDFGMARIVAVDQNEESTHRIVGTYGYMSPEYAMFGQFSVKSDVFSFGVMVLEIINGKQKGNNSSESECIDDIRRHAWEKWREKSPLELLDPNMEGPYSREEVIKCIHIGLLCVQEEPNDRPTMATIVFYLNSPSLNFPSPREPAYYFKHNRTVDSITTSKELVNDSDSINGITISKFFPR 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181270g00040 186 Pfam Protein tyrosine and serine/threonine kinase 4 134 IPR001245 GO:0004672|GO:0006468
Stsc181270g00040 186 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 1 181 - -
Stsc181270g00040 186 SUPERFAMILY Protein kinase-like (PK-like) 2 165 IPR011009 -
Stsc181270g00040 186 ProSiteProfiles Protein kinase domain profile. 1 141 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc181270g00040 186 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase B120 14 141 - -
Stsc181270g00040 186 Gene3D Transferase(Phosphotransferase) domain 1 1 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181270g00040 Stsc-Chr181270 208294 209406 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181270g00040 1 186 Receptor kinase-like Gene Family AT4G23150 48.404 3.15e-58 191
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Stsc181270g00040 PK_Tyr_Ser-Thr 4.5e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181270g00040 - - adu:107467162 350.517