Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181270g00031 ATGAAAGTCGTCGCTGATACTTTTTCGCGCCGCCGTGTTCGCCTCCACGTTCCAGCAGTCGCAGATTCTTATTCAGCTCCCAACCTCCAGCCTCTGCGCCCCTGCAGCTTTCTGTCGTGCCTCCAACATCCATTCGCTGATAAGCGGCGAAACTTGAATGTTAGCAATGGCACTCAAGGGTCCAAAGTAAAATTTAGGGTTACCAGAATCAAAGCTGCTCCTGCTGGTATTGCTACCCCAATTGCTGCTTGTAATGTTGTTGTTGCTACTGGAGAGGATGCTACTCCTGCCACTAATGTGACTGATCACCCTGATCCTTCTTCTATTGCTGTGGGTGATTCCTCTCAATATGAAGAAGATGCCAAGAATCCTCCGTGGTACAATGCAATGGTTCTTGAAGCACTGTCAGCTCTGAAAGATGTTAATGGATCTGACCTGAATGTCATTGTTAATTTTATTGAGGTGAGGATGAATGAGATTGGAAAGACCAGAAATGCTTTTAACATTGTATTTCCAATTGTATTTGTGTTTGGAGAGGGGTGGGGGAAGGTGGTGGAGTGA 561 0.4617 MKVVADTFSRRRVRLHVPAVADSYSAPNLQPLRPCSFLSCLQHPFADKRRNLNVSNGTQGSKVKFRVTRIKAAPAGIATPIAACNVVVATGEDATPATNVTDHPDPSSIAVGDSSQYEEDAKNPPWYNAMVLEALSALKDVNGSDLNVIVNFIEVRMNEIGKTRNAFNIVFPIVFVFGEGWGKVVE 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181270g00031 186 MobiDBLite consensus disorder prediction 96 117 - -
Stsc181270g00031 186 SUPERFAMILY "Winged helix" DNA-binding domain 121 168 IPR036390 -
Stsc181270g00031 186 MobiDBLite consensus disorder prediction 96 114 - -
Stsc181270g00031 186 PANTHER SINGLE MYB HISTONE 4 47 157 IPR044597 GO:0003691
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181270g00031 Stsc-Chr181270 133442 134725 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181270g00031 45 157 Single Myb Histone (SMH) Gene Family AT1G17520 41.593 6.64e-14 66.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181270g00031 - K09422 gmx:778177 96.2857