Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181270g00022 ATGGTACTTTCCAGAATGCTATTATTTCTTTGTATCATTGTCATACTCTTTCCTCAACCCAAAGCGCAGTCAAACTTCCTATATCACTTCTGTATGAATGACAAAGGTAATTACAGTGCTAATAGTACCTACAGAAGCAACCTTAACACCCTTTTATCCAACCTTTCTTCAAACAAAAACATTAATTATGGCTTCTACAACTTCTCCTATGGGGAAGACAATGACCGAGTTAATGCGATTGGGCTATGTAGAGGAGATGTTAAGCAAAATGATTGCCTTAGCTGCCTCAATGATTCAAGAGTCCTACTCACAAGACTCTGTCCAAATCAAAAGGAAGCAATTGGTTGGTATGACAATTGCATGCTTCGCTACTCGAACCGATCATCAATATTTAACAGCAGGGAAACTTTACCTAGTTTCTACATGAGTAACACTGGAAATGCAACATATGTTGATCAGTTCAACCAAGTGCTGGATACCCTTCTAAATGATCTAATAAGCAAGGCTGCATCAGGGAACTCGCAGCTAAAATTCGCTGCATCAAGTGCACAAGGACCAGGCTTCCAAACACTTTATGGTCTTGTTCAGTGTACACCTGATTTGTCTCAGCAAGAATGCAATACTTGTTTGATTCAGGCTATCACAGGAATCCCACAATGTTGTGATAGCAAGAAAGGTGCTAGAATTGTGGAACCTAGCTGTAACTTCAGGTATGAGATATACCCCTTCTATGACCTTACAAATGTTTCACCTCCACCAGCACCAGCACCACCACCAGATTCTGCTTCTCATCCCTCATCTATTGATACGGTTTCAACACAAGGAAAGAGCAGCAACACATCACGAAATGTAGTAATAGCAATAGTGGTGCCAATTACTGCTTTGGTTATACTGATCATCCTTATCTGCATCTATATAAGGAGGAGGAGGATGCGGTTACCAAGACAGGTTGAAGCACTCAATTCTCGAAATTCATCGCCAGTTAAAGCTGAAGATAGTGATGAATTTAGATCATCTGAGACATTGCAGTTGGACTTTACCACCATCATCGCCGCTACCAACAACTTTTCTGATGAGAATAAGCTAGGACAAGGTGGATTTGGTCCCGTTTACAAGGGAAGGCTCTCCAATGGGCAGGAAGTTGCAGTCAAAAGATTGTCCAGAAATTCTTTGCAGGGAGATTTAGAGTTTAAGAATGAAGTGATGTTAGTCGCCAAGCTTCAGCACCGAAACTTGGTTAGGCTACTTGGCTTTTGTTTGGAAAGAAGCGAAAGGTTACTGATTTATGAATATGTTCCCAATAAAAGCCTTGATTTCTTCATATTTGACCAAATCAAACGTGCCCAACTGGATTGGAAAAGAAGGTACAAAATCATAGGAGGCATTGCTAGAGGTTTACTTTACCTTCACGAGGATTCGCGCTTGAGAATCATTCATCGTGATCTCAAAGCAAGCAACATTCTTTTAGACACAGAAATGAACCCAAAAATATCAGATTTCGGCTTGGCAAGACTGTTTACCTTGGATCAGACTCAAGGCAACACAAGTAGAATTGTTGGAACTTATGGATATATGGCGCCAGAGTATGCTTTTCATGGACAATTTTCAACAAAGTCAGACGTTTATAGTTTTGGTGTACTGGTTCTAGAGATTGTAAGTGGCCAGAAGAACAGTGGTGTTCGTCGAGGGGGGAATACAGAGGACATAGTGAGCTTTGCATGGAGAAGCTGGAGGGAAGGGACAGCCTCAGACATTGTTGATCCGACAATCAGTGATGGATCAAGAAATGAAATAATGAGATGTATCCACATTGGGTTGCTTTGTGTTCAGGAAAATGTAGGTGACAGACCAAGCATGGCTTCAGTTGTAATCATGCTTAACAGCCACTCTGTTACTCTTCCATTGCCTTCACAACCTTCTCTTGTGATTGATAATAGAAGCTTATCAGACATCTATTCAGAAGAGTACAATTCTGAGACAAGAGGTTCAACAGGATCAGGTAACCAATCTGTTCAAGCATCCGTGAATGAAGCTTCGATCACTGAGCCATTTCCCCGCTAG 2061 0.4124 MVLSRMLLFLCIIVILFPQPKAQSNFLYHFCMNDKGNYSANSTYRSNLNTLLSNLSSNKNINYGFYNFSYGEDNDRVNAIGLCRGDVKQNDCLSCLNDSRVLLTRLCPNQKEAIGWYDNCMLRYSNRSSIFNSRETLPSFYMSNTGNATYVDQFNQVLDTLLNDLISKAASGNSQLKFAASSAQGPGFQTLYGLVQCTPDLSQQECNTCLIQAITGIPQCCDSKKGARIVEPSCNFRYEIYPFYDLTNVSPPPAPAPPPDSASHPSSIDTVSTQGKSSNTSRNVVIAIVVPITALVILIILICIYIRRRRMRLPRQVEALNSRNSSPVKAEDSDEFRSSETLQLDFTTIIAATNNFSDENKLGQGGFGPVYKGRLSNGQEVAVKRLSRNSLQGDLEFKNEVMLVAKLQHRNLVRLLGFCLERSERLLIYEYVPNKSLDFFIFDQIKRAQLDWKRRYKIIGGIARGLLYLHEDSRLRIIHRDLKASNILLDTEMNPKISDFGLARLFTLDQTQGNTSRIVGTYGYMAPEYAFHGQFSTKSDVYSFGVLVLEIVSGQKNSGVRRGGNTEDIVSFAWRSWREGTASDIVDPTISDGSRNEIMRCIHIGLLCVQENVGDRPSMASVVIMLNSHSVTLPLPSQPSLVIDNRSLSDIYSEEYNSETRGSTGSGNQSVQASVNEASITEPFPR 686
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181270g00022 686 Pfam Salt stress response/antifungal 31 126 IPR002902 -
Stsc181270g00022 686 Pfam Salt stress response/antifungal 146 240 IPR002902 -
Stsc181270g00022 686 CDD STKc_IRAK 362 627 - -
Stsc181270g00022 686 ProSiteProfiles Gnk2-homologous domain profile. 26 129 IPR002902 -
Stsc181270g00022 686 MobiDBLite consensus disorder prediction 656 686 - -
Stsc181270g00022 686 Gene3D - 137 243 IPR038408 -
Stsc181270g00022 686 Gene3D - 22 128 IPR038408 -
Stsc181270g00022 686 Gene3D Transferase(Phosphotransferase) domain 1 432 633 - -
Stsc181270g00022 686 ProSiteProfiles Protein kinase domain profile. 356 632 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc181270g00022 686 MobiDBLite consensus disorder prediction 656 679 - -
Stsc181270g00022 686 SUPERFAMILY Protein kinase-like (PK-like) 346 654 IPR011009 -
Stsc181270g00022 686 ProSitePatterns Serine/Threonine protein kinases active-site signature. 477 489 IPR008271 GO:0004672|GO:0006468
Stsc181270g00022 686 FunFam cysteine-rich receptor-like protein kinase 10 432 633 - -
Stsc181270g00022 686 Gene3D Phosphorylase Kinase; domain 1 317 431 - -
Stsc181270g00022 686 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 24 129 - -
Stsc181270g00022 686 ProSiteProfiles Gnk2-homologous domain profile. 136 243 IPR002902 -
Stsc181270g00022 686 FunFam Cysteine-rich receptor-like protein kinase 10 319 431 - -
Stsc181270g00022 686 FunFam Cysteine-rich receptor-like protein kinase 10 138 243 - -
Stsc181270g00022 686 SMART serkin_6 356 632 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc181270g00022 686 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 19 682 - -
Stsc181270g00022 686 Pfam Protein tyrosine and serine/threonine kinase 359 623 IPR001245 GO:0004672|GO:0006468
Stsc181270g00022 686 MobiDBLite consensus disorder prediction 251 277 - -
Stsc181270g00022 686 MobiDBLite consensus disorder prediction 263 277 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181270g00022 Stsc-Chr181270 101081 104239 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181270g00022 5 686 Receptor kinase-like Gene Family AT4G21410 49.856 0.0 645
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Stsc181270g00022 PK_Tyr_Ser-Thr 3.7e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181270g00022 - - gmx:113000773 928.702