Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181270g00017 ATGGCGCCGGAATACGCTATGTACGGACAGTTTTCAGTTAAATCAGATGTCTTTAGCTTTGGTGTCCTAGTTCTTGAAATCGTGAGCGGCGAAAAACAAAATTGCACACGCCGCTGCGGAGATACTTTAGAGGAGTTACCCCTAAGCTTTGCATGGAGAAATTGGATGGAGGGGAGAGGTGCAAGCATTATAGATCCATCACTAAGCAACAGTAATGCAGAAAATGAAATACTGAGATGCATTCACATTGGTTTGCTGTGTGTTCAAGAGAATTTAGTCGAGAGACCAACCATGGCTTCCATTGTATTGATGCTTAATAGCCCATCTCTGAGTCTTCCAGTACCTACGGAACCTGCATTTTTTGCGGGTGGCAGAGCCAAAACCCCTCGGGGTGGAGGAGAGAAACAGTCTGAGGAGTATATTCTAAAGGGAACAAATGAATCAACAGGCATATCAGTTCAAGAGTTTACCATTACTAAGCTATACGCTCGCTAG 495 0.4424 MAPEYAMYGQFSVKSDVFSFGVLVLEIVSGEKQNCTRRCGDTLEELPLSFAWRNWMEGRGASIIDPSLSNSNAENEILRCIHIGLLCVQENLVERPTMASIVLMLNSPSLSLPVPTEPAFFAGGRAKTPRGGGEKQSEEYILKGTNESTGISVQEFTITKLYAR 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181270g00017 164 Pfam Protein tyrosine and serine/threonine kinase 1 103 IPR001245 GO:0004672|GO:0006468
Stsc181270g00017 164 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 1 160 - -
Stsc181270g00017 164 Gene3D Transferase(Phosphotransferase) domain 1 1 111 - -
Stsc181270g00017 164 SUPERFAMILY Protein kinase-like (PK-like) 1 121 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181270g00017 Stsc-Chr181270 80903 81735 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181270g00017 1 120 Receptor kinase-like Gene Family AT4G21410 61.667 3.89e-44 152
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Stsc181270g00017 PK_Tyr_Ser-Thr 4.1e-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181270g00017 - - vra:106771832 187.193