Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181270g00015 ATGGCACCCGAATATGCGATGTATGGACAATTTTCAGTGAAGTCGGATGTATTTAGCTTTGGTGTAATAGTGCTCGAAATTGTTAGTGGCAAAAGACACATGGGGAATGGCAATGGGGAAAGTGCAGAGCAGCTATTAAGCTTTGCATGGAGAAATTGGAAGGAAGGAACAGCTATAAATATTGCAGATCCATCATTAGGAAATATTTCACGAAATGAATTTATGAGATGCATTCACATTGGTTTGCTTTGTGTTCAAGAAAATTTAGCAGATAGGCCAAACATGGGTTCAATTGTATTAATGCTGAATAGTTATTCTGTGACTCTGCCAACACCTTCAGAACCTGCATTTTTTGTGGGGACTAGAACTAGAAGCCGTCCATTATCAGGCATACAATCAGGGGGGAATAATTCAACAACAACAAGAACAAGTGAATCAACAAGTAAATCAGCTCAAGAATCAGAAAATGAGGCTTCCATTACTGAACTATATCCTCGCTAA 501 0.3872 MAPEYAMYGQFSVKSDVFSFGVIVLEIVSGKRHMGNGNGESAEQLLSFAWRNWKEGTAINIADPSLGNISRNEFMRCIHIGLLCVQENLADRPNMGSIVLMLNSYSVTLPTPSEPAFFVGTRTRSRPLSGIQSGGNNSTTTRTSESTSKSAQESENEASITELYPR 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181270g00015 166 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 1 165 - -
Stsc181270g00015 166 Gene3D Transferase(Phosphotransferase) domain 1 1 110 - -
Stsc181270g00015 166 MobiDBLite consensus disorder prediction 125 159 - -
Stsc181270g00015 166 MobiDBLite consensus disorder prediction 124 166 - -
Stsc181270g00015 166 Pfam Protein tyrosine and serine/threonine kinase 1 40 IPR001245 GO:0004672|GO:0006468
Stsc181270g00015 166 SUPERFAMILY Protein kinase-like (PK-like) 1 123 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181270g00015 Stsc-Chr181270 74587 75193 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181270g00015 1 166 Receptor kinase-like Gene Family AT4G21410 52.976 3.26e-50 169
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Stsc181270g00015 PK_Tyr_Ser-Thr 1.7e-07 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181270g00015 - - ahf:112776564 241.891