Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181269g00050 ATGTGGAAGCTATTGAGGGAGTACAGCCAGGTCCTGGTGGTTACCTCCGATAACGTTGGTTCCAACCAGATTAACGGCATTCGGAGGGGTTTGAAGGGCGATTCCGTGGTCGTCATGGGCAAGAACTCCATGATGAGACGCTCTTTCATGCTCCAAGCTCAAAAAACTGGAAACAAGTCTTTTCTCAACCTTATCCCTCTTCTTAGGGTTGTTGATCCTCTTCTCATGTGCCCCAAGTACTTATCATATGAATCGTACCGCAATTGTTCCTACATGCAATCTGGACAGTTACCTTTGGGCCTCAAGTGTTGTAACCAGCAGTCGTCGCAGGATTCTGAGCCTTTTCTGGTGTCCTCAAAATTCACACCGCACCAGCACTGTGCCCTGATGAGATCAAAACAGTTCTTGGCAATGAGTGTATGGTCTCCTCTTCTACTTTTAGCTGGTAGCATGTGA 456 0.4737 MWKLLREYSQVLVVTSDNVGSNQINGIRRGLKGDSVVVMGKNSMMRRSFMLQAQKTGNKSFLNLIPLLRVVDPLLMCPKYLSYESYRNCSYMQSGQLPLGLKCCNQQSSQDSEPFLVSSKFTPHQHCALMRSKQFLAMSVWSPLLLLAGSM 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181269g00050 151 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P0 3 69 - -
Stsc181269g00050 151 SUPERFAMILY Ribosomal protein L10-like 3 49 IPR043141 -
Stsc181269g00050 151 Gene3D - 1 75 IPR043141 -
Stsc181269g00050 151 Pfam Ribosomal protein L10 3 55 IPR001790 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181269g00050 Stsc-Chr181269 208636 210241 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181269g00050 3 69 Cytoplasmic Ribosomal Protein Gene Family AT2G40010 64.179 2.04e-25 97.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181269g00050 K02941 - nnu:104590633 98.9821