Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181269g00024 ATGGCTCCTGTGTTGATCATGATGATGATGATGCTCTCCTCCGCCATGGGAGCAGACACCGACTCATTCGTATTCGGAGGATGCTCACAGATCAAGTTCATGCCAGGTTCACCCTACGAGAACAGCGTCAACTCCCTCCTAACCTCGCTCATAAACTCAGCAACCTTCACAAACTACAACAACTTCACAATTCAGCCAACAACTCCCTCCTCCAACACCGCCACCCTGTACGGACTCTACCAGTGCCGCGGAGACCTCTCAAACGAGCGCTGCTCCCGCTGCGTGGAGCGTGCCGTCACTCAGCTGGGGACGCTCTGCCTCGACGCATGCGGGGGAGCCTTGCAGCTCGACGGATGCTTCGTCAAGTACGACAATGTCACCTTCTTGGGAGTGGAAGACAAGACTGCGGTCACCAAGAAATGTGGACCGTCCATTGGCTTCACCTCAGATGCCATGGCCAGCCGTGATGATGTGCTGGCTAATTTGGAGGCGTCCGATAAGACTTACCGGAAGACTGGGTCAGGGAATGTAGTGGGTGTGGCGCAGTGCACGGGAGACCTTAGCCCATCGGAGTGTCAGGATTGCGTCTCAACTGCAATCGAACGGTTGAAAATGGAGTGCGGGGCATCCACGTGGGGTGACATGTATCTCGCAAAGTGCTACGCGCGATACTCCGAAGGTGGAAGCTACTCGCGCAACACTAATGATGATAGCAATCACAATGATGATGAAATTGAGAAGACACTGGCCATTCTAATTGGTCTCATAGCTGGTGTTGCTCTAATCATCGTTTTCCTCTCCTTCTTGTCCAAGGTCTGCGAAAAGCACAAAGGTGGTAAATAA 843 0.5302 MAPVLIMMMMMLSSAMGADTDSFVFGGCSQIKFMPGSPYENSVNSLLTSLINSATFTNYNNFTIQPTTPSSNTATLYGLYQCRGDLSNERCSRCVERAVTQLGTLCLDACGGALQLDGCFVKYDNVTFLGVEDKTAVTKKCGPSIGFTSDAMASRDDVLANLEASDKTYRKTGSGNVVGVAQCTGDLSPSECQDCVSTAIERLKMECGASTWGDMYLAKCYARYSEGGSYSRNTNDDSNHNDDEIEKTLAILIGLIAGVALIIVFLSFLSKVCEKHKGGK 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181269g00024 280 Gene3D - 20 128 IPR038408 -
Stsc181269g00024 280 Gene3D - 131 227 IPR038408 -
Stsc181269g00024 280 Pfam Salt stress response/antifungal 31 125 IPR002902 -
Stsc181269g00024 280 Pfam Salt stress response/antifungal 154 225 IPR002902 -
Stsc181269g00024 280 FunFam Cysteine-rich repeat secretory protein 60 149 227 - -
Stsc181269g00024 280 ProSiteProfiles Gnk2-homologous domain profile. 21 128 IPR002902 -
Stsc181269g00024 280 PANTHER ANTIFUNGAL PROTEIN GINKBILOBIN-2-LIKE 5 273 - -
Stsc181269g00024 280 ProSiteProfiles Gnk2-homologous domain profile. 129 229 IPR002902 -
Stsc181269g00024 280 FunFam cysteine-rich repeat secretory protein 3 20 128 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181269g00024 Stsc-Chr181269 103508 105874 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181269g00024 1 224 Pollen Coat Proteome AT4G20670 22.041 3.31e-13 66.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181269g00024 - - adu:107481466 479.944