Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181269g00021 ATGGAGAGAGATTTCATGGGTCTAAGCTCAAAGGAGCCACAAGCTGTGGTCAAAGAGGAGATCACCGATGATGCCTCCAAAGACTCTGGGTTCAGCAAAGGCTCCACTCCTCAATGGTTTTTCTCAAGCAAAGTCTCTGCTGTTCCTCAATTGATGTCTTTCAAGGTTTCTCAAGATGACAAGCCTTTTGACTCCACTCAAAAGTGCCCTGCTCCTGAACTTCAGAAATCTTTCAATCACAATGGACAAGGTGGCTTTCATTTTTCCATGACCTCGTATCCTGTACAACATGATGTCAATTCTGTGAATCGTCCTCATGATGTGAAGATGTTTTCAGTTTCCAATCAAACAATTTCAGTTTCTGTGGGGAATCCATACCTGAAGAATCACTTTGCAACGCCTGCTCAGAATACGGGCAGTGCTAATGTGAAGCAGACATTACTTGGGGGAATACCCGTTACACCGCTTCATTCAGTTGCTGGAATACCTGAATCACGCAATGTGAAAACAGGTGCACCTTCTGCACAACTTACCATCTTCTATGCCGGTACTGTCAATGTCTTCGAAGATATCTCTGCTGAAAAGGCACAAGCTATTATGTTGTTGGCTAGCAAGGAGTTGGCACAACCCAAGGTTCAGTCACCTGTCTCAAAGTTGGGAGCTGGTGATAGTTTGCCTGTTAGTCAACCTGCAAATACACCACCATGCTCAGGTGTTCCAAGTCCTTTATCTGTCTCATCGCATACCGGTGCACATTCAGGGAGTGGCTCCACTAGTACTGATGAATTTCTGACTGCTAAATCGACTGGAATTCCCACCGCTTCTGTTAGTAAGGTGGAGCCTCCAAAAGTAGTAGTCAGCGCAACCGCTATGTTGACTTCAGCTGTGCCACAGGCTCGAAAAGCATCGTTGGCTCGTTTTCTAGAGAAGCGCAAGGAGAGGGTGATGAATTCAGCACCATATAACCTGAACAAGAAGAGTGAGGAGTGTGCTACCAGCAATGCTTCTAATGGCCTACCAGTCAAGCAAGGATAG 1035 0.4589 MERDFMGLSSKEPQAVVKEEITDDASKDSGFSKGSTPQWFFSSKVSAVPQLMSFKVSQDDKPFDSTQKCPAPELQKSFNHNGQGGFHFSMTSYPVQHDVNSVNRPHDVKMFSVSNQTISVSVGNPYLKNHFATPAQNTGSANVKQTLLGGIPVTPLHSVAGIPESRNVKTGAPSAQLTIFYAGTVNVFEDISAEKAQAIMLLASKELAQPKVQSPVSKLGAGDSLPVSQPANTPPCSGVPSPLSVSSHTGAHSGSGSTSTDEFLTAKSTGIPTASVSKVEPPKVVVSATAMLTSAVPQARKASLARFLEKRKERVMNSAPYNLNKKSEECATSNASNGLPVKQG 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181269g00021 344 MobiDBLite consensus disorder prediction 226 263 - -
Stsc181269g00021 344 Pfam tify domain 173 204 IPR010399 -
Stsc181269g00021 344 SMART tify_2 170 205 IPR010399 -
Stsc181269g00021 344 ProSiteProfiles Tify domain profile. 170 205 IPR010399 -
Stsc181269g00021 344 Pfam Jas motif 297 321 IPR018467 -
Stsc181269g00021 344 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 109 333 IPR040390 -
Stsc181269g00021 344 MobiDBLite consensus disorder prediction 214 263 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181269g00021 Stsc-Chr181269 90215 92826 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181269g00021 39 333 Tify Gene Family AT3G17860 34.568 1.57e-27 108
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Stsc181269g00021 tify 7.4e-17 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181269g00021 K13464 - gmx:100807043 413.305