Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181269g00014 ATGGTGGAATCCATACAGACAATGGACCCCGACATTTCGCGGTGGTTTGCGGAATTCCAACTCCGGAGTTCCGCTCCGGACTCTGTCGTCTCCAAAGTCCTGAAGTCGCTTAACCTCTCCAAAGTCGATCACAAACTTAAGAAAACACTTCTCCTCCGCATCCTCCGATCCGAAATCAACAATGCTTCAATCACCGAAACCGCTCTCGAACTACTCGAGCAACTCGAAGCGATTGACCCAAACGACGCGGTTCCGGTCCTCGATTTCTTGCGCAAAGCCTACTGCGCCGTCGCCGTCGAATGCACCGTCAAGTTCCTCTCCGCCACCTCTGACGGCATAGCCAGCACTGAGTACCAATCCGCCGTGGCGCGTATCTGGCGCGGCCGCGTGGTGGAGTTGGAGCGCCGTAAGAGCAAGCTGTTCTCCGACGAGATTGTGCAGTGGAGGAACGACATTGAGGCTGCAATTCTTGACACTAGGGTTTTTGAGAGGTTAGCAAAGTTAAATACCCGACACGATGCGTTTTCTGCGGTTAGGTTTTATCTGCAGAAAGTGGGGGAAACGATGGGTCCTTGTTTTCTTGAATCGTTGGCGGAAATGAAATGGAAGGACAAAACGGAGAATCACAAGGAGAAAGGATTGGCGACTCGGGTTTTGGATCCGGTGCCACAGGCTGTAGCCGAAGGGTCCTGGAAAGATGCGTGCAGAAATTCCTCTGGTGCTGGACAGATGAGGGATCATGGTGACAATGAAAAGGAAAACGAAAATCATAATGAGAATGTGAATGACAATGATGGTGCACATTGTAATGAGGGCGTTGAGATGAATGGTGGACATGAGGGGAAGGAACATATGGAGGAGAGAGCTAAAGGTTCTGTCGATGGCACCCAGGAGCCTGCAAAGGGGGAGAAAGCAAGTGAGAAGGGCAATCCTCAACTTCGACGAAAGCTCCCAGCATTTCTTAGATGCCATAAAGGTGTTAAAATATCTAGTGCTGAGGAATTGGGCACTGAAAATCCAAGGAGCAAAAATGGTAATGAGAAAAGTGCTGAAGATATATCTGATGCTATTGGATCTAAACTTGCACAGAAAGGTACAAATCAAGAACCACCCATGGAAAGCAAGAGTGGGGATGTAGATGTGCCAAACTCAAATACTTGCGGGGTTAATGTCCTTTGTCAACCTAATGATGCTGAGAAGAAATCTGTTCATTATAGTAGAGTTCAAGTTCAGCATCCCAATTTTAGGAAGCAGAATAGTACTGCTCACGGAAGGCCCAATTTGAGGGAGCAAAACCGTACTGCTCTCGAAAGTCCCAATTTGAGGGAGCAGAACATTACTGCTCATAATGATGAGAGGGATAATTCAAAAGATGACTTGCCACAAGATGACTTGCCCAGTGGAGTGCAGTTGAGAAGGAAGAAAAGGAAATGGTCTTCATTGGAAGAGGAGACCCTAAGAACTGCTGTAAAAACGTACGGCGTAGGAAATTGGACAACAATTCAAAGTTTTTACAAGAACGTATTTGAAAATAGACGAGCAGTGGATTTGAAGGACAAATGGAGAAATATGACGCGGTAG 1581 0.4725 MVESIQTMDPDISRWFAEFQLRSSAPDSVVSKVLKSLNLSKVDHKLKKTLLLRILRSEINNASITETALELLEQLEAIDPNDAVPVLDFLRKAYCAVAVECTVKFLSATSDGIASTEYQSAVARIWRGRVVELERRKSKLFSDEIVQWRNDIEAAILDTRVFERLAKLNTRHDAFSAVRFYLQKVGETMGPCFLESLAEMKWKDKTENHKEKGLATRVLDPVPQAVAEGSWKDACRNSSGAGQMRDHGDNEKENENHNENVNDNDGAHCNEGVEMNGGHEGKEHMEERAKGSVDGTQEPAKGEKASEKGNPQLRRKLPAFLRCHKGVKISSAEELGTENPRSKNGNEKSAEDISDAIGSKLAQKGTNQEPPMESKSGDVDVPNSNTCGVNVLCQPNDAEKKSVHYSRVQVQHPNFRKQNSTAHGRPNLREQNRTALESPNLREQNITAHNDERDNSKDDLPQDDLPSGVQLRRKKRKWSSLEEETLRTAVKTYGVGNWTTIQSFYKNVFENRRAVDLKDKWRNMTR 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181269g00014 526 PANTHER MYB TRANSCRIPTION FACTOR 8 526 - -
Stsc181269g00014 526 CDD SANT_TRF 476 526 - -
Stsc181269g00014 526 ProSiteProfiles Myb-like domain profile. 470 525 IPR001005 -
Stsc181269g00014 526 MobiDBLite consensus disorder prediction 402 477 - -
Stsc181269g00014 526 MobiDBLite consensus disorder prediction 446 461 - -
Stsc181269g00014 526 MobiDBLite consensus disorder prediction 229 314 - -
Stsc181269g00014 526 Pfam Myb-like DNA-binding domain 475 524 IPR001005 -
Stsc181269g00014 526 MobiDBLite consensus disorder prediction 407 445 - -
Stsc181269g00014 526 MobiDBLite consensus disorder prediction 245 264 - -
Stsc181269g00014 526 Gene3D - 478 526 - -
Stsc181269g00014 526 SUPERFAMILY Homeodomain-like 472 525 IPR009057 -
Stsc181269g00014 526 MobiDBLite consensus disorder prediction 363 383 - -
Stsc181269g00014 526 MobiDBLite consensus disorder prediction 331 351 - -
Stsc181269g00014 526 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 472 526 IPR017930 -
Stsc181269g00014 526 SMART sant 474 526 IPR001005 -
Stsc181269g00014 526 MobiDBLite consensus disorder prediction 275 294 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181269g00014 Stsc-Chr181269 65001 68173 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181269g00014 478 524 Single Myb Histone (SMH) Gene Family AT1G15720 51.064 1.84e-06 48.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Stsc181269g00014 Myb_DNA-binding 8.3e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181269g00014 - - adu:107476251 559.296