Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181267g00028 ATGCCCTCCCGACACTGGAAAATCGCACAATCCGCTGTGCTAGTGGGAGCAGTCACGCGCCTAGTTGCTTGCAAGAGGGGATCCGCGCTGCTTTCTTCGGGGCTGTTAGGAAGAGCCAGTTCGAAGATCTTCCTTAGGATCCTCTTCCTGTGCTTCAGCCATACCAACCATTTCTTGATTTGTTCTTCCCGATGGCATCCGTATCCAAGGAGGAAGAGAAAAGGAAAGGCAGTAGTAGCTCATGAAGAAGATGACTTCGATGCTCTCAGATTTAAATCTCCATTCAATGACATTTTTATAACTCCAATCTCTGATCCTCCGTCCCCAATCTCCGTCGCGCCTCCGTCCACCGTAAGCTCCGTCTCGAACCCCAACCGCTGTCGACCAGAACATTGTCTGTCGCGCCCTCCTTCGTCCTTGTCGCCGCGTGGTCCCTCCGTCCCGCTCCCTGGCTCTGTCATCCCTCCTCAGTCTGTCGTTGGGGCTTCTCTCCATCAACCCTTCAGCGGTTTCCGTCGTCGCGTCAGCCCTTCGTCAGAGCATCCGTCGCTGAGCTCGTCCGTGCCTCCTCTTCAGGGAAAACCTAACCACCTCTTGAACCAGAGAACCCTAGCCGCCGCCGACTTCGCCACCGTACGACCACCGCGCAGCCACCTGAACCTCCATCACCTCTTCTCAGCCACCGTCGAGTCACGTCTCGTCTTCATCGCCAACTTCGTCACCACCGCCTGGAGGTTCGTCGTCCGTCACGCCTTGCCGCCGTCCTTGCACGTCCGTCGCTCTCTCTGTACCGTGCTTGCCCAGCTTCTCTCGCCCTCTGCTGGCTGTTCTCGGCGGTCTCTGAGGTGCTGCTCTGTTTCCTCCGTCAGGAAAGTGGACATGCTTGAGGGATTCTCTGTTGTTAGATCTGAGAAGGTTAAGGAAGAACTCATTTTGGATGGAAATGACATTAAGCTTGCGTCTCTGTCCTGCGCTCTGATTAACTAG 987 0.5562 MPSRHWKIAQSAVLVGAVTRLVACKRGSALLSSGLLGRASSKIFLRILFLCFSHTNHFLICSSRWHPYPRRKRKGKAVVAHEEDDFDALRFKSPFNDIFITPISDPPSPISVAPPSTVSSVSNPNRCRPEHCLSRPPSSLSPRGPSVPLPGSVIPPQSVVGASLHQPFSGFRRRVSPSSEHPSLSSSVPPLQGKPNHLLNQRTLAAADFATVRPPRSHLNLHHLFSATVESRLVFIANFVTTAWRFVVRHALPPSLHVRRSLCTVLAQLLSPSAGCSRRSLRCCSVSSVRKVDMLEGFSVVRSEKVKEELILDGNDIKLASLSCALIN 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181267g00028 328 MobiDBLite consensus disorder prediction 171 196 - -
Stsc181267g00028 328 Gene3D - 276 328 IPR036789 GO:0003735|GO:0005840|GO:0006412|GO:0019843
Stsc181267g00028 328 MobiDBLite consensus disorder prediction 111 152 - -
Stsc181267g00028 328 MobiDBLite consensus disorder prediction 172 196 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181267g00028 Stsc-Chr181267 182675 185558 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181267g00028 177 328 Cytoplasmic Ribosomal Protein Gene Family AT1G33140 31.138 3.07e-14 68.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181267g00028 K02940 - gmx:100810611 68.9366