Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181267g00020 ATGGCTATGGCTGCTACACGTGTCCCTTTCCTCTCCTCTACTAATGCTACTACTCCTTTTCAATGCCATAAATACTCACTTCCCTCAACGGTTTCTTCTTCCTCGTTAAGGCTTCTTCCTTCTCCTTCTTCTTGTTCTTCTTTGTTGTCTTTGTCATCATCTTTTGCTACAAGGAGGAGCCATAAGGGTGTGAAGGGGAGGGTGGGAATTAGTGTTGTTGCCATGGCTGATTCATCAAAGAGAACTGTGATTGTCACTGGTGCTGGTGGCCGTACAGGACAAATAGTGTATAAAAAACTAAAAGAGCGGCCAAATGAGTATGTTGCAAGAGGCCTTGTTAGAACTGAAGAAAGCAAACAGAAAATTGGCGGTGCAGATGATGTTTTCGTGGGGGACATCAGAGATGCTGATAGTATCGTTCCTGCGATTCAAGGTGTGGATGCTCTAATAATTCTTACAAGTGCAGTGCCACAGATGAAACCTGGGTTCGATCCAACCAAAGGTCAACGACCCGAGTTCTATTTTGAAGATGGTGCATATCCTGAACAGGTTGACTGGATTGGGCAGAAAAACCAAATAGATGCTGCTAAGGCTGCAGGAGTGAAGCAGGTTGTGTTGGTAGGGTCTATGGGAGGAACAGACCTTAACCATCCTTTGAACAGCTTGGGTAATGGGAATATATTGGTTAGTTATTTTTCCTCCTCCGAATATTGCTTGCATTTCGTTTTAGAGCTCGATGCAACATGTATTTTGTATTGA 759 0.4374 MAMAATRVPFLSSTNATTPFQCHKYSLPSTVSSSSLRLLPSPSSCSSLLSLSSSFATRRSHKGVKGRVGISVVAMADSSKRTVIVTGAGGRTGQIVYKKLKERPNEYVARGLVRTEESKQKIGGADDVFVGDIRDADSIVPAIQGVDALIILTSAVPQMKPGFDPTKGQRPEFYFEDGAYPEQVDWIGQKNQIDAAKAAGVKQVVLVGSMGGTDLNHPLNSLGNGNILVSYFSSSEYCLHFVLELDATCILY 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181267g00020 252 PANTHER NITROGEN METABOLIC REGULATION PROTEIN NMR-RELATED 76 237 IPR044163 GO:0016491
Stsc181267g00020 252 Pfam NAD(P)H-binding 87 219 IPR016040 -
Stsc181267g00020 252 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 80 221 IPR036291 -
Stsc181267g00020 252 Gene3D - 78 250 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181267g00020 Stsc-Chr181267 125645 129523 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181267g00020 75 238 Monolignol Biosynthesis Gene Families AT2G33590 30.814 2.02e-06 46.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181267g00020 - - gmx:100794855 298.901