Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181267g00017 ATGGATCCACATCTTCATGGATTTGGTGGTTCCACAAAGGAAATCCGGTTTGGGAATCAGTCTTTGCCAATTCTGCAGAATCAGAGGTTTGAAAATGTTTTATTTGATCAAAGTAGGGAATTTGGTTACCTTCAATCCAATCTACTGCCACCAGCCAATAATAATACACATTCATCCTCAATTTTGTCAAATGATGAGCCTTCTCCGGAGGACTGCGATTTTTCCGATGCCATTTTGGGTTACATCAATCAGATCCTAATGGAAGAAGACATGGAAGATAAGACATGTATGCTTCAAGATTCTTTGGATCTTCAAGTTGCCGAGAAATCATTATATGAGGTGATAGGTGAAAAGTATCCATCTCAGCCCTTAGGAAATCATAGTGGTATTAATCCAAATGATTTGGAAGGAGCTAATGATTTTTTTGTAAACTATGGTAGTGGTAGTCATCTTGTTAATGATGGCGATCTTAGTAGCATCGTTACAAGTAGTTCGTTTCTTCGGAACTCGAAGGAAGTACATCGCCAAAACTTTCAAGGGAATAGCATTTCACAGTCATCTAATAGTTCTTCTTCAAATAGTGTAATAAGTAGCGTCGAAGGTCCTGTTGAATCTCCAAACAGTATTCTTCAGATGCCAGATATGAGCAGTGAGAGTCAATCTATTTTGCAGTTTCAGAAGGGTGTTGAGGAGGCTAGTAAGTTTCTTCCGAGTGGAAATGGGCTTTTTTCCAATTTTAATGCTGCTAAGTTGTCGTCACCATTAGAGCCTAAATCGGGGACCAAGGCATCATTGTCTGTTAAGGTAGAGAAGGATGATGGGGAGTCTTTTCTTGCTGGATCCAAGGGAAGAAAGCATTCTGACAGGGAAGAGGGAGATGGCGAAGAAAATAGAAGCAGCAAGCAAGCAGCAGTTTACTCGGAACCCACATTGCGGTCAGATATGATTGATATTATCTTGCTGCACAGTGCAGGGGATGGTAAGCAACATTATATGGCTCGTCGTGATGCTTTACAGAATAAGAACACCGACAAGATTTTGCCATCAAATGGTAAGTCAAAAGCATCCAAAACCGGGAAGGGGCGTGGCAAGAAACAAAATGGGAGAAAAGAAGTGGTTGATTTGAGAACACTTCTGGTTCTTTGTGCACAAGCTGTTGCAGCCGATGACTCGAAAAGTGCCCACGAGTTTCTTAAGCAGATCAAGCAACACTCAAGTCCCTTTGGAGATGGAAGTCAGAGGTTAGCTCACATGTTTGCAGATGGTCTCGAGGCACGCTTGGCAGGCACTGGAAGCCAAATCTATAAAGGCTTAGTTTGTAAAAGAACATCAGCAGCTGATGTTCTTAAAGCATACCATCTTTACCTTGCTGCTTGCCCTTTTAGAAAGATTTCAAATTTTATGTCAAACATTAAAATTAGGACATCTTCGGCAGACTCAATGAGAGTCCATGTTATAGATTTTGGCATCCTTTATGGTTTCCAGTGGCCGACTTTTATTCAGAGGCTTTCGTGGAGATCCGGGGGACCACCGAAGCTTCGGATCACAGGAATTGATTTCCCACAACCTGGTTTCAGGCCTGCGGAGAGAATTCTTGAAACGGGACGTCGCCTGGAAGCTTATGCTGAAACTTTCAATGTCCCATTTGAGTACAACGCCATAGCGAAGAAGTGGGAAACAATTCAACTCGAAGAACTGAAGATCGATAGGGACGAGTACCTTGTTGTTACTTGTTTTTACCGAGGCAAGAACTTATTGGATGAATCTGTGGTAGTGGACAGTCCGAGGAATAAGTTCCTCAGTTTGATAAGGAAGATCAACCCGGACATCTTCATTCATGGCGTCATTAACGGGGCCTTCAATGCTCCTTTTTTCGTTACTCGGTTCAGGGAAGCACTGTTTCACTACTCTTCACTGTTTGACATGCTTGAAACTATTGTGCCTCCCTGTGAAGGCTGCGAGAGAGTCGAGCGGCCGGAGACATATAAGCAGTGGCAAGTCAGGATATTAAGGGCCGGGTTTACACAACAACCTTTCGATCGTAAGTTAATAGAGATGGCAATGGATAAAGTAAGGTCTGGCTTCCACAAGGATTTCCTAATTGATGAAGATGGTCAGTGGTTGGTGCAAGGTTGGAAGGGGCGAATCATTTACGCACTCTCTTGTTGGAAACCTGCATGA 2181 0.4292 MDPHLHGFGGSTKEIRFGNQSLPILQNQRFENVLFDQSREFGYLQSNLLPPANNNTHSSSILSNDEPSPEDCDFSDAILGYINQILMEEDMEDKTCMLQDSLDLQVAEKSLYEVIGEKYPSQPLGNHSGINPNDLEGANDFFVNYGSGSHLVNDGDLSSIVTSSSFLRNSKEVHRQNFQGNSISQSSNSSSSNSVISSVEGPVESPNSILQMPDMSSESQSILQFQKGVEEASKFLPSGNGLFSNFNAAKLSSPLEPKSGTKASLSVKVEKDDGESFLAGSKGRKHSDREEGDGEENRSSKQAAVYSEPTLRSDMIDIILLHSAGDGKQHYMARRDALQNKNTDKILPSNGKSKASKTGKGRGKKQNGRKEVVDLRTLLVLCAQAVAADDSKSAHEFLKQIKQHSSPFGDGSQRLAHMFADGLEARLAGTGSQIYKGLVCKRTSAADVLKAYHLYLAACPFRKISNFMSNIKIRTSSADSMRVHVIDFGILYGFQWPTFIQRLSWRSGGPPKLRITGIDFPQPGFRPAERILETGRRLEAYAETFNVPFEYNAIAKKWETIQLEELKIDRDEYLVVTCFYRGKNLLDESVVVDSPRNKFLSLIRKINPDIFIHGVINGAFNAPFFVTRFREALFHYSSLFDMLETIVPPCEGCERVERPETYKQWQVRILRAGFTQQPFDRKLIEMAMDKVRSGFHKDFLIDEDGQWLVQGWKGRIIYALSCWKPA 726
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181267g00017 726 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 308 717 IPR005202 -
Stsc181267g00017 726 MobiDBLite consensus disorder prediction 251 307 - -
Stsc181267g00017 726 MobiDBLite consensus disorder prediction 265 298 - -
Stsc181267g00017 726 ProSiteProfiles GRAS family profile. 366 724 IPR005202 -
Stsc181267g00017 726 Pfam GRAS domain family 650 724 IPR005202 -
Stsc181267g00017 726 Pfam GRAS domain family 375 648 IPR005202 -
Stsc181267g00017 726 MobiDBLite consensus disorder prediction 342 356 - -
Stsc181267g00017 726 MobiDBLite consensus disorder prediction 178 223 - -
Stsc181267g00017 726 MobiDBLite consensus disorder prediction 339 368 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181267g00017 Stsc-Chr181267 101019 103843 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181267g00017 70 725 GRAS Transcription Factor Family AT2G37650 50.146 0.0 628
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Stsc181267g00017 GRAS 3.2e-81 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181267g00017 - - ccaj:109816616 1063.14