Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181266g00016 ATGGCTGCTAAACGGTTGTTCGATGATTCTGATAGAGATGCCCAAGAGCCAAGCGACAAACGCATCCGACCCAATAGGCCTTCTCTTGCTTCGATAATAGGAGAAGTAGTAATGGTGAAGAACATGCAGAACCTGTTCTCAGCAGGGTTGGAGCCATTGCTAAGAAGAGTGGTAAATGAAGAAGTGGAACGAGTCATAATGAGACACCATCATCCCTACACACGCTCTCCATCACTCAGAATTGAAGCAGCAGCAGCATCATCATCGGAGCAATCACCCAAGTTGCAACTCATGTTCACGAACAAGCTTTCCCTCCCAATATTCACAGCAAGCAGAATACTCGACATTCAAGGGAACCCCATGCAGGTCATTCTTGTTGACAGAACAAACAAAGATCAAATTGTTCGAACAAGCCTTCCCTATCCCATAAAGCTAGAGCTGGTGGTACTTGATGGTGATTTTCCGGGTGGCAGCAACGGCGACAGCGACGACGAGTCGTGGTGCAGCGAGCAGTTTAAGAGGCATATAGTGAAGGAGAGAACAGGGAAGAGGCCGTTGCTGACTGGAGAGTTGAGCCTGACGATGAGGGATGGGATTGCTGCCATGAGTGGGGAGATTGAGTTCACGGATAATTCAAGCTGGATCCGTAGCAGAAAGTTCAGAGTTGCTGTGAGGGTTGCTCCTAACCAACAAGGTGGTCTCAGAATTCGTGAAGGCTTCACTGAACCCTTCGTAGTTAAGGATCACCGTGGTGAATTGTACAAAAAGCATCACCCACCAATGCTGGAGGACGAAGTGTGGCGCCTAGAAAAGATTGGAAAAGATGGAGCTTTCCACAAAAAGCTCTCAGCAGAGGGCATTAATACAGTCCAAGAATTCCTCAAGTTATCCGTTCTTGATCCTCAATTGCTTAGAAAGATATTAGGGGTTGGAATGTCAGAGAAGATGTGGGAAGTGACAATAAAGCATGCAAAGACATGTAAGATGGGGAACAAAGCTTATATGTACAGCGGCTCTAATTGTACTATCTATCTCAATCCAATATGCCAGTTGATTAGAGCTGATATCAATGGCCAAATCCTTCTAGGCAGAGACCTAAACACCATCAATAAGAGCTATTTAGAGAAGATGGTGAGAGAAGCATATGGTAGATGGAATGAGTTGGAGGAAATTGATCATGCCATTTTGAATGATAACGCTGCTTTGCTAACACAAGAAATAGGAGGGGAGCAATTATTTGGAAACAACCATGAAGCAGCAGGAGGTGGTAATACACTTGAATATGGTGAAAGCGAGTATTTTGGTGAGGAAGCAGCAGGAGCAGGTGGTAGTGGCTTTGTGCCAAGCAGTAGCCATAGCCATAGCCATAATAATGAGTGCATAGAATGGGGACTGAATGCACCATTCGATGCATCACAGGTTCTGAATGTGAATGCCATGGCTTACGGCTTCTCATCAAAGAGTGGAGCTTCAACTTCTGATTCTGACATGTGGCCTAATTAA 1503 0.4538 MAAKRLFDDSDRDAQEPSDKRIRPNRPSLASIIGEVVMVKNMQNLFSAGLEPLLRRVVNEEVERVIMRHHHPYTRSPSLRIEAAAASSSEQSPKLQLMFTNKLSLPIFTASRILDIQGNPMQVILVDRTNKDQIVRTSLPYPIKLELVVLDGDFPGGSNGDSDDESWCSEQFKRHIVKERTGKRPLLTGELSLTMRDGIAAMSGEIEFTDNSSWIRSRKFRVAVRVAPNQQGGLRIREGFTEPFVVKDHRGELYKKHHPPMLEDEVWRLEKIGKDGAFHKKLSAEGINTVQEFLKLSVLDPQLLRKILGVGMSEKMWEVTIKHAKTCKMGNKAYMYSGSNCTIYLNPICQLIRADINGQILLGRDLNTINKSYLEKMVREAYGRWNELEEIDHAILNDNAALLTQEIGGEQLFGNNHEAAGGGNTLEYGESEYFGEEAAGAGGSGFVPSSSHSHSHNNECIEWGLNAPFDASQVLNVNAMAYGFSSKSGASTSDSDMWPN 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181266g00016 500 PANTHER OS02G0177800 PROTEIN 1 473 IPR012416 GO:0005516
Stsc181266g00016 500 MobiDBLite consensus disorder prediction 1 23 - -
Stsc181266g00016 500 Pfam Calmodulin binding protein-like N-terminal domain 95 249 IPR046831 -
Stsc181266g00016 500 Pfam Calmodulin binding protein C-terminal domain 332 391 IPR046829 -
Stsc181266g00016 500 MobiDBLite consensus disorder prediction 1 25 - -
Stsc181266g00016 500 Pfam Calmodulin binding protein central domain 261 327 IPR046830 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181266g00016 Stsc-Chr181266 125657 129348 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181266g00016 3 398 Calmodulin-binding Proteins AT5G57580 46.782 2.04e-108 334
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181266g00016 - - gmx:100788183 525.783