Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181266g00015 ATGGCTGCTAAACGGTTGTTCGATGATTCTGATAGAGATGCCCAAGAGCCAAGCGACAAACGCATCCGACCCAATAGGCCTTCTCTTGCTTCGATAATAGGAGAAGTAGTAATGGTGAAGAACATGCAGAACCTGTTCTCAGCAGGGTTGGAGCCATTGCTAAGAAGAGTGGTAAATGAAGAAGTGGAACGAGTCATAATGAGACACCATCATCCCTACACACGCTCTCCATCACTCAGAATTGAAGCAGCAGCAGCATCATCATCGGAGCAATCACCCAAGTTGCAACTCATGTTCACGAACAAGCTTTCCCTCCCAATATTCACAGCAAGCAGAATACTCGACATTCAAGGGAACCCCATGCAGGTCATTCTTGTTGACAGAACAAACAAAGATCAAATTGTTCGAACAAGCCTTCCCTATCCCATAAAGCTAGAGCTGGTGGTACTTGATGGTGATTTTCCGGGTGGCAGCAACGGCGACAGCGACGACGAGTCGTGGTGCAGCGAGCAGTTTAAGAGGCATATAGTGAAGGAGAGAACAGGGAAGAGGCCGTTGCTGACTGGAGAGTTGAGCCTGACGATGAGGGATGGGATTGCTGCCATGAGTGGGGAGATTGAGTTCACGGATAATTCAAGCTGGATCCGTAGCAGAAAGTTCAGAGTTGCTGTGAGGGTTGCTCCTAACCAACAAGGTGGTCTCAGAATTCGTGAAGGCTTCACTGAACCCTTCGTAGTTAAGGATCACCGTGGTGAATTGTACAAAAAGCATCACCCACCAATGCTGGAGGACGAAGTGTGGCGCCTAGAAAAGATTGGAAAAGATGGAGCTTTCCACAAAAAGCTCTCAGCAGAGGGCATTAATACAGTCCAAGAATTCCTCAAGTTATCCGTTCTTGATCCTCAATTGCTTAGAAAGATATTAGGGGTTGGAATGTCAGAGAAGATGTGGGAAGTGACAATAAAGCATGCAAAGACATGTAAGATGGGGAACAAAGCTTATATGTACAGCGGCTCTAATTGTACTATCTATCTCAATCCAATATGCCAGTTGATTAGAGCTGATATCAATGGCCAAATCCTTCTAGGCAGAGACCTAAACACCATCAATAAGAGCTATTTAGAGAAGATGGTGAGAGAAGCATATGGTAGATGGAATGAGTTGGAGGAAATTGATCATGCCATTTTGAATGATAACGCTGCTTTGCTAACACAAGGTATGTTGAAGTCTTGTGTTGGTATTATATGTATAATTCTTTCTTGGACTCAAACTAATTCAATTAGTCAATTTATATGGCAGAAATAG 1305 0.4429 MAAKRLFDDSDRDAQEPSDKRIRPNRPSLASIIGEVVMVKNMQNLFSAGLEPLLRRVVNEEVERVIMRHHHPYTRSPSLRIEAAAASSSEQSPKLQLMFTNKLSLPIFTASRILDIQGNPMQVILVDRTNKDQIVRTSLPYPIKLELVVLDGDFPGGSNGDSDDESWCSEQFKRHIVKERTGKRPLLTGELSLTMRDGIAAMSGEIEFTDNSSWIRSRKFRVAVRVAPNQQGGLRIREGFTEPFVVKDHRGELYKKHHPPMLEDEVWRLEKIGKDGAFHKKLSAEGINTVQEFLKLSVLDPQLLRKILGVGMSEKMWEVTIKHAKTCKMGNKAYMYSGSNCTIYLNPICQLIRADINGQILLGRDLNTINKSYLEKMVREAYGRWNELEEIDHAILNDNAALLTQGMLKSCVGIICIILSWTQTNSISQFIWQK 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181266g00015 434 Pfam Calmodulin binding protein C-terminal domain 332 391 IPR046829 -
Stsc181266g00015 434 MobiDBLite consensus disorder prediction 1 23 - -
Stsc181266g00015 434 Pfam Calmodulin binding protein-like N-terminal domain 95 249 IPR046831 -
Stsc181266g00015 434 PANTHER OS02G0177800 PROTEIN 1 399 IPR012416 GO:0005516
Stsc181266g00015 434 MobiDBLite consensus disorder prediction 1 25 - -
Stsc181266g00015 434 Pfam Calmodulin binding protein central domain 261 327 IPR046830 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181266g00015 Stsc-Chr181266 125657 129348 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181266g00015 3 398 Calmodulin-binding Proteins AT5G57580 47.030 1.62e-109 335
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181266g00015 - - gmx:100788183 516.153