Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181265g00019 ATGATGGGGTTCTCCCAAGGAATCTCAACTGAAAGAAAGCACCAAGATTCTCACTTCAAGAACCTCAAAGTCAGAACCTTTTTGAGAAAACTGATATGGGACTTTGCCTTTGCATGTGTTGCTTCACCTTCTTGCACTTGTAGCAGTGCCAAAACCCATGGCAAAGGATTCAAGAACACAACTTTGGATCACAAGAAGGCTCTGTTGCTGGCAGAATCTAATGGGGTTGCAGAAGAATTAGTGAACAATAATGAGCCTCAATCGGTTCATTCATCTTTCAGGTTCAGCTTTCGTTCTCAGCTTGAGCTTGAATCCTTCAACATGAGTTCTTCTTCTTCTGCTGCTGCTGCTAAGGTAGCCTTGTTGATGGTGAATTTGGAGTTTGAGTCTCTGAAATGGAGGACAATGGATCCATTGGAGAAGACAATAACCCCACTGACCAACAATTTAATCAGGTTCAATTATCATGAAATTGTGCATGCTACTCGCAATTTCTCCAAAGGTAGAGTTTTGGGAAGAGGGGCTTTGAGCTGTGTTTTTAGGGGAAAAGTTGGGATATTGAGAACATCTGTTGCAATCAAACGATTGGACAAAGAAGACAAAGAGTGTGGCAAGGCCTTTTCCAGAGAGTTGATGATTGCTAGTTCTCTTCACAACACAAACATTGTTCCTCTTTTGGGATTCTGCATTGACTCTGAGGAAGGCTTGTTTTTGGTCTACAAATTTGTCTCTGGAGGAAGCTTAGACCATCACTTGCATGGTAGGAAGAGAAGTAGTGGTGGTTCACCACTTCCATGGTCTGTGAGATATAAAGTTGCAATTGGGATTGCAAAGGCTATAGCTTATCTGCATTATGGAACTGAAAGATGTGTTGTTCATAGAGATATTAAGCCTTCAAATATTCTGCTTTCTTCTAAAAAGATTCCAAAGTTATGTGATTTTGGATTAGCTACATGGACAGTTGCACCTTCAGTACCTTTTCTATGCAAAGCCGCCAAAGGAACATTTGGTTATTTAGCCCCTGAATATTTTCAACATGGAAAAGTGTCAGATAAGACTGATGTTTATGCTTTTGGAGTGGTTTTATTGGAACTCATAACTGGCAGGAAGCCAATTGAAGCAAAGAGGACTCAAGGAGAAGAGAACTTGGTCTCATGGGCTAAACCTTTGCTACAGAAAGGGAAACTAGCTTTAGAAAAGTTGCTTGATCCTCAACTCTGTCATAGCAGTTCGAGATTCTCGAGCCAAATAGCCCGGATGATCGAAGCGGCGGCCGCTTGTATTACATACGAAGAATCTAGGAGGCCCGGCATATCCGAGATTCTTGCGATACTAAAAGGTGAACAAGAACCTGTTCTCTCTAGGAGGAGGAAGTCTGGTTATTACACACAGTTACAACAAAGTAATAGTGATATGAAAAGTCACTTGGCTTTGGCAATGCTGGGGGTATCAGAGATCGAGGATGATGATTATCTTTATTGTCGCTAA 1488 0.4153 MMGFSQGISTERKHQDSHFKNLKVRTFLRKLIWDFAFACVASPSCTCSSAKTHGKGFKNTTLDHKKALLLAESNGVAEELVNNNEPQSVHSSFRFSFRSQLELESFNMSSSSSAAAAKVALLMVNLEFESLKWRTMDPLEKTITPLTNNLIRFNYHEIVHATRNFSKGRVLGRGALSCVFRGKVGILRTSVAIKRLDKEDKECGKAFSRELMIASSLHNTNIVPLLGFCIDSEEGLFLVYKFVSGGSLDHHLHGRKRSSGGSPLPWSVRYKVAIGIAKAIAYLHYGTERCVVHRDIKPSNILLSSKKIPKLCDFGLATWTVAPSVPFLCKAAKGTFGYLAPEYFQHGKVSDKTDVYAFGVVLLELITGRKPIEAKRTQGEENLVSWAKPLLQKGKLALEKLLDPQLCHSSSRFSSQIARMIEAAAACITYEESRRPGISEILAILKGEQEPVLSRRRKSGYYTQLQQSNSDMKSHLALAMLGVSEIEDDDYLYCR 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181265g00019 495 Gene3D Transferase(Phosphotransferase) domain 1 243 465 - -
Stsc181265g00019 495 SUPERFAMILY Protein kinase-like (PK-like) 152 464 IPR011009 -
Stsc181265g00019 495 ProSiteProfiles Protein kinase domain profile. 165 453 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc181265g00019 495 Pfam Protein kinase domain 166 442 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc181265g00019 495 FunFam Putative receptor-like serine/threonine-protein kinase 243 461 - -
Stsc181265g00019 495 SMART serkin_6 165 453 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc181265g00019 495 FunFam probable serine/threonine-protein kinase PBL7 127 242 - -
Stsc181265g00019 495 Gene3D Phosphorylase Kinase; domain 1 150 242 - -
Stsc181265g00019 495 ProSitePatterns Serine/Threonine protein kinases active-site signature. 291 303 IPR008271 GO:0004672|GO:0006468
Stsc181265g00019 495 PANTHER OS08G0249100 PROTEIN 95 479 IPR046958 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181265g00019 Stsc-Chr181265 157181 159914 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181265g00019 153 473 Trihelix Transcription Factor Family AT1G70460 40.000 4.90e-67 227
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Stsc181265g00019 Pkinase 1.2e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181265g00019 - - adu:107481060 671.774