Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181264g00010 ATGGGTAGCAGAGTGGGTAAGCTCTGCGTATGTTCCTCCAGCGCCGGCTCCGCCGCCGCCGGAGAAATCTCCAGCAGATTCGACGACGGCACTGCCTTCGTCTCCGATTCACATGAAAAATCTCTCGGTGACTCCATCTGTTATGTCAGACCAGATAATTCTCAGTTCTCCCCCGCCGCCGCCGGCAACGTGTTTTTCCGGTCTGTCTCCGGGGCCACGGTGAGTGCAAACAAGTCGTCAACGCCTTCGATCTCTCTTGATGATTCTCTTCAGCAAGAGAAAGCTATGGATTCCTCTGCTTCGTTTGAGAGTTCTGGTTCCTTCTCTTCCACAACGATGACAACGACAATGGTGCCTCTGCAACTGCAACAACACCCAAAGAGCCCGTTCGATGAAACCGTTGTTGAGAAAGGTTATGATTATGAAACCGCGAATAAGAAAACATGTAGCAGAAGTAGTTTGAAGAAGAGACCCAATGCTAACGCCAGAGTGAGTTGTAGCACTAATTTGACTGATGAATTGAAGCTTCATAGCGTTGTTGATGATGATGGCGATGACGATGATAAGTGTTATTTGTCGGCGTCAAAGGGATGTAAGAACTTTCATTGGGCTCATGGTAGAGGCGGCGAGGATCGTTTGCATATCGTAATTTGTGAGAATCATGGATGGGTTTATGTTGGGATTTACGATGGATTCAATGGTCCTGATGCGACTGATTATCTTCTGAACAATTTGTTTCGTGCTGTATATGAAGAACTGAATAAGATAATGTGTCAAGATTGCAAGAAAGAGTGTGGTGATGTTCTGGAAGGTCTTTCGGCGGCGATGAGGAGGGCGGAGGAGGCGTTTCTTAAGAGGTCAGATGAGATGATTGGAGAGAATCCGGTGTTGGCTATGATGGGTTCTTGTGTGTTGGTAATGTTGATGAAGGGGGAAGATGTGTACTTGATGAATGTTGGAGACAGCCGTGCTGTGTTAGCAACTCCCAATGGCAATTCTCTTCAGCTTACAATGGACCATAGCACTCTTGTTAAAGAGGAGGTTGGTAGAATATGGAGGGAGCACCCAGATGACCCTTCGGCTGTAACTAAGGGAAGGGTTAAAGGTCACTTAAATGTCACAAGGGCTTTTGGGGTTGGCTTCCTTAAGCAGCCTAAACAAAACAATGCAATGTTAGAGACATTCAAAGTGAAGTACATTGGAGAGTCCCCATACATTACATGCTGCCCATCACTCCACCACCATAGACTCACTCCAAATGACAAATTCCTCTTACTCTCTTCCGATGGACTTTTCCAATACTTCACCAATCAAGAAGCACTTTCCAAAGTGGAATACTTCGTTGCTATGTTCCCAGATACAGATCCTGCACAACTTCTCATTCAAGAAGCACTCAATAGAGCTGCCAAAAAAGCTGGTATGAAGTTGCATGAGTTGCTTGATATCCCACAAGGAGAAAGACGACTTTACCATGATGACATTTCTATTGTCATCATCTCTTTGGAGGGAAAAATATGGCGTTCGTAA 1527 0.4565 MGSRVGKLCVCSSSAGSAAAGEISSRFDDGTAFVSDSHEKSLGDSICYVRPDNSQFSPAAAGNVFFRSVSGATVSANKSSTPSISLDDSLQQEKAMDSSASFESSGSFSSTTMTTTMVPLQLQQHPKSPFDETVVEKGYDYETANKKTCSRSSLKKRPNANARVSCSTNLTDELKLHSVVDDDGDDDDKCYLSASKGCKNFHWAHGRGGEDRLHIVICENHGWVYVGIYDGFNGPDATDYLLNNLFRAVYEELNKIMCQDCKKECGDVLEGLSAAMRRAEEAFLKRSDEMIGENPVLAMMGSCVLVMLMKGEDVYLMNVGDSRAVLATPNGNSLQLTMDHSTLVKEEVGRIWREHPDDPSAVTKGRVKGHLNVTRAFGVGFLKQPKQNNAMLETFKVKYIGESPYITCCPSLHHHRLTPNDKFLLLSSDGLFQYFTNQEALSKVEYFVAMFPDTDPAQLLIQEALNRAAKKAGMKLHELLDIPQGERRLYHDDISIVIISLEGKIWRS 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181264g00010 508 PANTHER PROTEIN PHOSPHATASE 2C 155 499 IPR015655 GO:0004722|GO:0006470
Stsc181264g00010 508 SUPERFAMILY PP2C-like 209 502 IPR036457 -
Stsc181264g00010 508 CDD PP2Cc 209 501 IPR001932 -
Stsc181264g00010 508 Gene3D - 175 506 IPR036457 -
Stsc181264g00010 508 MobiDBLite consensus disorder prediction 75 108 - -
Stsc181264g00010 508 ProSiteProfiles PPM-type phosphatase domain profile. 193 501 IPR001932 -
Stsc181264g00010 508 SMART PP2C_4 194 499 IPR001932 -
Stsc181264g00010 508 Pfam Protein phosphatase 2C 222 470 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181264g00010 Stsc-Chr181264 67066 72412 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181264g00010 1 508 PP2C-type Phosphatase Gene Family AT1G07630 39.793 4.04e-148 437
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181264g00010 - - sind:105174446 428.713