Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181263g00022 ATGGAGATTAGTGCTTCTATCTTATTATTATCATGGATGTTCCTCCTCCTCTTGTTCTTCTTCTTCATCTTCTCAACTACAAAGAAACGCCACAAATTCCAAAACATATCTTCTAATAATAATAAGGCTAAGCTTCCACCTGGGTCAATGGGTTGGCCTTACATAGGTGAAACTCTTCAACTGTATTCCCAAGACCCTAACATCTTCTTCGCTTCCAAACAGAAAAGATATGGCGAGATTTTTAAGACACACATACTAGGTTGTCCATGCGTCATGCTTGCCAGTCCTGAGGCTGCTAGGTTTGTGTTGGTCACACATGCTCACTTGTTCAAACCTACATACCCAAAGAGTAAAGAGAACTTGATTGGTCCTTCTGCATTGTTCTTCCACCAAGGACATTACCATACTCTCATCAGGAGGCTTGTTCAGAACTCCCTCTCTCCCGACGCCATCCGACCACTCATCCCCGAGATCGAGACCCAGGTTCTTTCTTCCTTGGAATCCTGGGTCTCCGCCGGGGGAGTCGTCAACGCCTTCCAAGAAATGAAAAAGTTCTCTTTCAACATTGGGATCCTCTCGGTGTTTGGTAACATGGAAGGAAATTATAGAGATGAACTTAAAGAGAACTACAGCATAGTTGAGAAAGGCTACAATTCTTTCCCAACAATGATTCCTGGAACTTCATATTCCAAAGCACTCATGGCAAGGAAGAGGATCAGGGAGATAATAAGTGAAATAATTAGCAAGAGGAAGGAGAAAAATAGATTGATGGAGAAGGATCTATTGGGTCACATGTTGAAATACAAAGATGAAAAGGGGGAAACTCTAAGTGATGAACAAATAGCAGATAATGTTATTGGGGTTCTGTTTGCGGCTCAAGACACAACAGCAAGTGTTCTAACATGGATTCTCAAGTATCTTCATGATGACCAGAAACTTCTTGAAGCAATCAAAGCAGAACAAATGGCAGTATATGAAGCAAATGAAGAAGGGAAGATGCCATTGACATGGGGTCAAACCAGAAATATGCCATTTACTCATAGGGTTATATTGGAAAGCCTAAGGATGGCAAGCATCATATCTTTTACATTTAGGGAGGCTGTGGTTGATGTAGAATATAAAGGATATCTCATACCAAAAGGTTGGAAGGTAATGCCACTATTCAGGAATATCCACCATAATCCAGAATTCCACCCTGCTCCTCAAAATTTTGACCCCTCAAGATTTGAGATGGCTCCAAAGCCCAACACTTTCATGCCATTTGGCAATGGAGTTCACTCTTGTCCAGGAAATGAGCTTGCAAAGTTGAACATGCTCATTTTAATTCACCATTTGGTCACCAAATTTAGGTGGGAAGTTGTTGAAAATCAGAATGGAGTTCAATATAGCCCATTCCCTGTCCCTCTTCATGGTCTACCTACAAGATTTTGGAGAAAAGATTAG 1443 0.413 MEISASILLLSWMFLLLLFFFFIFSTTKKRHKFQNISSNNNKAKLPPGSMGWPYIGETLQLYSQDPNIFFASKQKRYGEIFKTHILGCPCVMLASPEAARFVLVTHAHLFKPTYPKSKENLIGPSALFFHQGHYHTLIRRLVQNSLSPDAIRPLIPEIETQVLSSLESWVSAGGVVNAFQEMKKFSFNIGILSVFGNMEGNYRDELKENYSIVEKGYNSFPTMIPGTSYSKALMARKRIREIISEIISKRKEKNRLMEKDLLGHMLKYKDEKGETLSDEQIADNVIGVLFAAQDTTASVLTWILKYLHDDQKLLEAIKAEQMAVYEANEEGKMPLTWGQTRNMPFTHRVILESLRMASIISFTFREAVVDVEYKGYLIPKGWKVMPLFRNIHHNPEFHPAPQNFDPSRFEMAPKPNTFMPFGNGVHSCPGNELAKLNMLILIHHLVTKFRWEVVENQNGVQYSPFPVPLHGLPTRFWRKD 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181263g00022 480 Gene3D Cytochrome P450 34 477 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181263g00022 480 FunFam Abscisic acid 8 35 478 - -
Stsc181263g00022 480 Pfam Cytochrome P450 46 457 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181263g00022 480 CDD CYP90-like 74 475 - -
Stsc181263g00022 480 PANTHER CYTOCHROME P450 26 43 466 - -
Stsc181263g00022 480 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 421 430 IPR017972 GO:0005506|GO:0016705
Stsc181263g00022 480 PRINTS P450 superfamily signature 291 308 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181263g00022 480 PRINTS P450 superfamily signature 428 439 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181263g00022 480 PRINTS P450 superfamily signature 348 359 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181263g00022 480 PRINTS P450 superfamily signature 419 428 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181263g00022 480 PRINTS E-class P450 group I signature 418 428 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181263g00022 480 PRINTS E-class P450 group I signature 347 365 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181263g00022 480 PRINTS E-class P450 group I signature 387 411 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181263g00022 480 PRINTS E-class P450 group I signature 280 297 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181263g00022 480 PRINTS E-class P450 group I signature 428 451 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181263g00022 480 PRINTS E-class P450 group I signature 74 93 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181263g00022 480 SUPERFAMILY Cytochrome P450 42 478 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181263g00022 Stsc-Chr181263 217439 221441 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181263g00022 8 478 Cytochrome P450 AT3G19270 69.427 0.0 690
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181263g00022 K09843 - gmx:100806350 791.956