Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181263g00016 ATGAAATATCTCGAGGCGATGAACAATGACTTCATAATCGGCACGCGATTCCGGATGAGACACGAGGGAGAAGATCCACTTGACAAAAGGTTTTGTGGTACTATAGTTGGAGTCGGAGATGAATCTCGAGAATGGCCGGATTCTCATTGGCGATCGTTGAAGGTTCAATGGGATGAACCAGCAATAATGCAAAGACCAGATAGAGTTTCATGTTGGGAGATTGAACCTCTCATTACGCCTTTGAATTCGATTCAACCAACTGCGAAGGGAAAAAGATCAAGGCATTCTGAGGCTTCATCTTCTGGTAGCAAAGAAAGCCAAGTATTGTGCTCTCAAAGACCCCGGAAACAACAAAGCCGTGGTCCCGGACTCCCGGTGGGTCCATCGGCGAAACCACGTGAAGCCCCGGCACCCGAGCCGAGTAAAGGCAAGAATGGCATGGACTGCTGGTTGTTTGGGATGAATTTGACCAGCAGCTATAGTAATGTTGTTACCCCTTTGGAGAAAGAACTTAGGTGTGAAGCTTCAACAATCCTTGATTGTGGTGCCTTCTTTGGGATATGA 564 0.4716 MKYLEAMNNDFIIGTRFRMRHEGEDPLDKRFCGTIVGVGDESREWPDSHWRSLKVQWDEPAIMQRPDRVSCWEIEPLITPLNSIQPTAKGKRSRHSEASSSGSKESQVLCSQRPRKQQSRGPGLPVGPSAKPREAPAPEPSKGKNGMDCWLFGMNLTSSYSNVVTPLEKELRCEASTILDCGAFFGI 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181263g00016 187 MobiDBLite consensus disorder prediction 83 144 - -
Stsc181263g00016 187 Gene3D - 10 80 - -
Stsc181263g00016 187 MobiDBLite consensus disorder prediction 100 118 - -
Stsc181263g00016 187 FunFam Auxin response factor 10 81 - -
Stsc181263g00016 187 Pfam Auxin response factor 2 54 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Stsc181263g00016 187 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 2 112 IPR044835 GO:0003677|GO:0006355|GO:0009725
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181263g00016 Stsc-Chr181263 176358 177642 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181263g00016 2 159 B3 DNA Binding Superfamily AT3G61830 41.808 1.52e-31 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181263g00016 K14486 - gmx:100795763 147.132