Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181263g00004 ATGCAGTACACGTGTGAAGTTGACGAAGAATATGTCCCCAAGGTTGGAATGTGGTTTGAAAGCGTTGAGGAAGCTGGACTATTCTATAATGAGTATGCGAAACGTGCAGGCTTCTCTACAAAGATAAGGAACTCAAATAGGTGTAAGGAGACCAAGGAAATAAAGAATCAACTCATCACTTGCAATAGAGAAGGGAGATGGACATCTGAAATACCCTCTGTAGAGAAGACGAACCCTATATGTGGTGCCAATTGTCCAGCACGAATTTATGTTCACATAGACAAGAAGACTCGACATTGGTGCATTTCTAAGGTTGTTCTCCATTATTCACATCCATGCTGTCCTGATAAAACTCAGATGTTACCACAACATAATGGGCTGAGCTTGGACGTTCGTAGGACGATAGAGAAAATAAATGAAAAGGAGAGGAGGATCGTTCCCAACGAAGAAGACGAAGTCCAAGCTGGTTCCATGGCTAGTGAAGGAAGATCATCAAGCTCAATACAACGTAGTACATTATGCAGCATTCAAGCTATGCAAGCAAGGGACGAGACGGATGTCATAGCACCAAGATCCCGACTTCCTTCGAAACCCTTATCCCAATCTTCTATCCCTCCAACTCTCATGGCCAAACGTTCACCACGGCAACTCCGGTATCAACGAATCCAACATCAGCCAGGGGTGGATCCAGGAAATTAA 699 0.4406 MQYTCEVDEEYVPKVGMWFESVEEAGLFYNEYAKRAGFSTKIRNSNRCKETKEIKNQLITCNREGRWTSEIPSVEKTNPICGANCPARIYVHIDKKTRHWCISKVVLHYSHPCCPDKTQMLPQHNGLSLDVRRTIEKINEKERRIVPNEEDEVQAGSMASEGRSSSSIQRSTLCSIQAMQARDETDVIAPRSRLPSKPLSQSSIPPTLMAKRSPRQLRYQRIQHQPGVDPGN 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181263g00004 232 MobiDBLite consensus disorder prediction 195 209 - -
Stsc181263g00004 232 MobiDBLite consensus disorder prediction 142 170 - -
Stsc181263g00004 232 Pfam FAR1 DNA-binding domain 28 114 IPR004330 -
Stsc181263g00004 232 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 5 151 - -
Stsc181263g00004 232 MobiDBLite consensus disorder prediction 182 232 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181263g00004 Stsc-Chr181263 29684 31555 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Stsc181263g00004 FAR1 9.2e-14 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181263g00004 - - aip:107636690 172.555