Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181262g00049 ATGAGCTCCGGCGGCGATTCTTCCGGCGGCGGAAGCAGCAGCTCCGACAACAAGGAGAAGGACAAGCAGAAGGAGAAGGCTAGGGTGAGTCGCACCTCCTTGATACTGTGGCACGCGCATCAAAACGACGCCGCTGCGGTGCGTAAGCTCCTCCAGGAGGATCCTTCACTCGTCAAGGCAAGGGATTACGATAACCGTACTCCTCTCCACGTCGCCGCACTCCACGGCTGGCTCGACGTCGCCAACTGCCTCATCGAGTTCGGAGCCGACGTCAACGCCCAGGATCGCTGGAAAAACACCCCTCTTGCCGATGCGGAAGGAGCTAGCAGGACTTCGGTGATTGAGCTCTTGAAATCTCACGGTGGATTGTCTTTTATTGACTTCTCTAACTCCACGCGTATTGGAAAGGGATCTTTTGGTGAGATTTTAAAAGCCTATTGGCGTGGGACTCCAGTTGCTGTCAAACGCATTCTTCCATCTCTTTCAGATGATCGATTGGTGATTCAGGACTTCAGGCATGAGGTCAATTTGTTGGTGAAGCTTCGACACCCTAATATAGTTCAATTTCTCGGAGCTGTTACTGACAGGACCCCCCTTATGTTAATTACTGAGTATCTAAGAGGGGGTGATCTTCATCAGTACCTCAAAGACAAAGGTTCATTGAGTCCTTCAACAGCTGTCAACTTTTCCATGGATATTGCCAGAGGCATGGCCTATCTTCACAATGAACCAAATGTTATAATTCATCGAGACCTAAAGCCAAGGAATGTTCTTTTGGTCAATTCTAGTGCCGATCATTTAAAAGTTGGGGATTTTGGATTGAGTAAAATTATCAAGGTCAAAAATGCTCATGATGTATATAAGATGACCGGTGAAACAGGGAGCTGTGAATATGATAAGAAGGTTGATGTGTACTCCTTTGCAATGATTTTGTATGAGATGCTTGAAGGTGAACCCCCTTTTGCAAGTTATGAACCTTATGATGCAGCCAAGCGTGCAGCAGAAGGACACAGACCTACTTTTCGGGCAAAGGGTTATACCCCTGAAATGCAAGAGTTAACACTACAGTGTTGGGCTGCTGACATGAATCAAAGACCTTCATTCATAGATATCCTTAAACGGCTTGAAAAGATCAAGGAAAGTTTACCTTCGGATCATCATTGGCATCTATTTACTTCATAA 1182 0.4645 MSSGGDSSGGGSSSSDNKEKDKQKEKARVSRTSLILWHAHQNDAAAVRKLLQEDPSLVKARDYDNRTPLHVAALHGWLDVANCLIEFGADVNAQDRWKNTPLADAEGASRTSVIELLKSHGGLSFIDFSNSTRIGKGSFGEILKAYWRGTPVAVKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNIVQFLGAVTDRTPLMLITEYLRGGDLHQYLKDKGSLSPSTAVNFSMDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSADHLKVGDFGLSKIIKVKNAHDVYKMTGETGSCEYDKKVDVYSFAMILYEMLEGEPPFASYEPYDAAKRAAEGHRPTFRAKGYTPEMQELTLQCWAADMNQRPSFIDILKRLEKIKESLPSDHHWHLFTS 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181262g00049 393 ProSitePatterns Protein kinases ATP-binding region signature. 134 155 IPR017441 GO:0005524
Stsc181262g00049 393 SUPERFAMILY Protein kinase-like (PK-like) 127 388 IPR011009 -
Stsc181262g00049 393 CDD STKc_MAP3K-like 134 375 - -
Stsc181262g00049 393 ProSiteProfiles Ankyrin repeat profile. 64 96 IPR002110 GO:0005515
Stsc181262g00049 393 SMART serkin_6 128 382 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc181262g00049 393 ProSiteProfiles Ankyrin repeat region circular profile. 64 96 - -
Stsc181262g00049 393 Gene3D - 7 127 IPR036770 -
Stsc181262g00049 393 PRINTS Tyrosine kinase catalytic domain signature 203 216 IPR001245 GO:0004672|GO:0006468
Stsc181262g00049 393 PRINTS Tyrosine kinase catalytic domain signature 241 259 IPR001245 GO:0004672|GO:0006468
Stsc181262g00049 393 PRINTS Tyrosine kinase catalytic domain signature 346 368 IPR001245 GO:0004672|GO:0006468
Stsc181262g00049 393 Pfam Ankyrin repeats (3 copies) 31 95 IPR002110 GO:0005515
Stsc181262g00049 393 Pfam Protein tyrosine and serine/threonine kinase 131 375 IPR001245 GO:0004672|GO:0006468
Stsc181262g00049 393 MobiDBLite consensus disorder prediction 1 26 - -
Stsc181262g00049 393 ProSiteProfiles Protein kinase domain profile. 128 389 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc181262g00049 393 FunFam serine/threonine-protein kinase STY46-like 124 207 - -
Stsc181262g00049 393 SMART ANK_2a 64 93 IPR002110 GO:0005515
Stsc181262g00049 393 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 112 381 - -
Stsc181262g00049 393 SUPERFAMILY Ankyrin repeat 31 133 IPR036770 -
Stsc181262g00049 393 FunFam Integrin-linked protein kinase family 207 391 - -
Stsc181262g00049 393 Gene3D Phosphorylase Kinase; domain 1 128 207 - -
Stsc181262g00049 393 Gene3D Transferase(Phosphotransferase) domain 1 208 389 - -
Stsc181262g00049 393 PIRSF ILK 1 126 - -
Stsc181262g00049 393 PIRSF ILK 122 393 - -
Stsc181262g00049 393 ProSitePatterns Serine/Threonine protein kinases active-site signature. 247 259 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181262g00049 Stsc-Chr181262 228719 233758 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181262g00049 4 393 MAP Kinase Kinase Kinase AT1G14000 75.058 0.0 663
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-5 Stsc181262g00049 PK_Tyr_Ser-Thr 1.3e-54 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181262g00049 - - adu:107481197 719.539