Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181262g00034 ATGCAAGTGGATTTGAGGAGTGAGTGTGCAACAGAGGAGATTCATGACCCCATCGAGGTTGACGAGGCTTACGTCCCAAAGGTTGGAATGTGGTTTGAAAGCGTCGAGGATGTTGGACTATTTTACAAAGAGTATGCCAAACGAGCAGGTTTCTCTACAAAGATAAGGAACTCAAATAGATGTGAGAACACCAAGGAAATAAAGAACCAACTCATCACTTGTACTAGAGAACAAAGGTGGACATTGGAGGTTCCTTCCTTAGAGAAGACGAACCCGATACGTGGTGCAAATTGTCCAGCACGAATTTATGTTCACATAGACAAGAAGAGTCGACTTAGGTGCATTTCGAAGGTTGTTCTCGATCATTCACATCCATGCTCTACTGAGAAAGCTCAGATGTTACCACAACATAGGGGTCTGAGCTTGGATGTTCGTAGGACAATAGAGAACAACGATTTATCAGGCATTAGGCCACGCCAAACATTCAGTCGTTTGTGA 498 0.4378 MQVDLRSECATEEIHDPIEVDEAYVPKVGMWFESVEDVGLFYKEYAKRAGFSTKIRNSNRCENTKEIKNQLITCTREQRWTLEVPSLEKTNPIRGANCPARIYVHIDKKSRLRCISKVVLDHSHPCSTEKAQMLPQHRGLSLDVRRTIENNDLSGIRPRQTFSRL 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181262g00034 165 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 10 164 - -
Stsc181262g00034 165 Pfam FAR1 DNA-binding domain 41 127 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181262g00034 Stsc-Chr181262 156289 157158 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Stsc181262g00034 FAR1 1e-11 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181262g00034 - - adu:110280446 181.415