Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181262g00029 ATGTGTTTGTTATTATGTTTTTCTGTGCATGTGGTGGCAGAAGCAACACCAAAGAGTCTTATGAGGGTGATGGGGATTCCAGGGCTCACTTTGTACCATCTCAAGAGCCATTTACAGAAATATAGACTTGGCAAAAGCCAACTACAACTAGAAATCTCTTCTGACAACAACAAACCTGAAGATTGTAGAGAAATGAAGAACATTGATGATCCTTGTAGAAGCAGAGAAGCAAGTATTGGGATACAGAATGAGATGACTGAAAGCATGCAAATTGCTGAGGCTCTCCAAATGCAAATGGAAGTACAGAAGAAACTTTATGAACAAATTGAGGTGCAGAGACACTTGCAGCTTAAGATTGAAGCACAAGGGAAGTACTTGCAATCAGTACTACACAAGGCACAAGAAACACTTGCAGAATACAGTTCTTGTCCGGCCTCGGCCGCGAAAGCTGAGCTTTCACAGTTAGTATCAATAATGAACAATGCCTGCCCCGGATCTCCTCCGGTTTCGGAACTGACAGAAACAAGAGGGTTGAGTTGGAGCCATGGGCAGAGGAAAGAGCACAGAGGAACCATGTGTTCACCTGAAATTGAAAGTTCTTTGACATCTTCTGAAAGCTCAATGGATCAAAGGCCTAATAATACTGCTTCAGTTGAATTGTTGCCACTATTCAAAGAATCCAAGGAGGATAAAGATGAAGGTATTATAGGGAGAAAGAGGAGTTCAAGCTGCTGTGTTGATCAGCCATCAAAGATGAGCAAAAAATCTGAATTAGTGCCCGATATCATTGACTTGAATTCAGAACAAATAGATTTGAATTGCAGTTCAAGCTTTTGGGAGCAATGA 846 0.4137 MCLLLCFSVHVVAEATPKSLMRVMGIPGLTLYHLKSHLQKYRLGKSQLQLEISSDNNKPEDCREMKNIDDPCRSREASIGIQNEMTESMQIAEALQMQMEVQKKLYEQIEVQRHLQLKIEAQGKYLQSVLHKAQETLAEYSSCPASAAKAELSQLVSIMNNACPGSPPVSELTETRGLSWSHGQRKEHRGTMCSPEIESSLTSSESSMDQRPNNTASVELLPLFKESKEDKDEGIIGRKRSSSCCVDQPSKMSKKSELVPDIIDLNSEQIDLNCSSSFWEQ 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181262g00029 281 MobiDBLite consensus disorder prediction 195 217 - -
Stsc181262g00029 281 NCBIfam myb-like DNA-binding domain, SHAQKYF class 14 44 IPR006447 GO:0003677
Stsc181262g00029 281 MobiDBLite consensus disorder prediction 166 256 - -
Stsc181262g00029 281 MobiDBLite consensus disorder prediction 223 238 - -
Stsc181262g00029 281 Coils Coil 92 112 - -
Stsc181262g00029 281 Pfam MYB-CC type transfactor, LHEQLE motif 89 136 IPR025756 -
Stsc181262g00029 281 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 14 230 IPR044848 GO:0003700
Stsc181262g00029 281 SUPERFAMILY Homeodomain-like 7 44 IPR009057 -
Stsc181262g00029 281 Gene3D - 8 47 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181262g00029 Stsc-Chr181262 116821 118433 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181262g00029 14 249 G2-like Transcription Factor Family AT1G69580 49.219 5.46e-53 174
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Stsc181262g00029 Myb_CC_LHEQLE 4.6e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181262g00029 - - gmx:100787178 274.633