Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181262g00021 ATGGAAAGCCAAATAAACCATCAACTCTCTAATTCAGGGGAACCCCTTAGAGGAGGAACTTCTTTCTTCAAAACATGTTTCAATGGAATCAATGCCTTGTCAGGTGTTGGGATACTCTCAATGCCGTATGCAGTGTCTCGTGGAGGGTGGCTGAGTTTAATCTTGCTCCTCATTGTTGCCATTATTTGTTGGTACACAGGGTTGCTTCTTCAAAGGTGCATGGACGTGCACCCATTAATCAAATCCTACCCTGACATAGGCGAGGTTGCTTTCGGTTACAAAGGAAGAGCTATGGTAGCCATTTTCATGTACTTAGAACTCTACTTAGTTGCTGTAGAGTTTCTCATACTAGAAGGTGACAATCTTGAGAAGTTATTTCCAAATATGAATTTCAAGATTGGTAGCCTTAGAATTGGAGGCAAAGCTGGTTTTATCATGCTTACTGTGCTGGCTATACTACCCACCACATGGCTAAGAAGTTTGGGAGTTCTGGCCTATATTTCTGTTGGTGGGGTTGTGGCTTCTGTTGTTTTGATTGTTTGTGTTGTGTGGGTTGGTGAAGTTGATGGAATTGGGTTTCATCAAAAGGGAGACATAATTCATTGGAAAGGCTTGCTTTCTAGTGTCAGCCTTTTTGCATTCTGTTATTGTGGACATCCAGTCTTCCCTACACTCCGCAATTCCATGAAAGATAAAACTCAATTTTACAAGGTTTTGATGGTATGCTTTATCATAAGCACTATAACCTATGGGTCCATGGCTATCATAGGGTACAAGATGTTTGGAGAATATGTGAATTCACAAGTGACATTAAATCTTCCAACAAACAAAATAAGCACCAAAATAGCAATTTACATCACTCTAATCAACCCTTTCACCAAGTATGCTGTTATAATCACCCCAATAGCCAATGCTATTGAAGAATCATTGCTTTTGCACAACAAGGGTCGTAGGCCTATTACCATTCTCATTAGAACAACCATTGTGCTAACTACCTTGCTTGTGGCATTATTCGTTCCCTTTTTCGGCTACGTTATGGCATTCATCGGCGCATTATTGAGTGTGACATGTTCATGGATTTTACCATGTTTGTGCTACTTAAAGATGAACAAACCAACTCAAAGATTTCGGATGGAATTGGTTATCATCATAGGAATTCTGTTTACAGGGTCAATTATTGCTATAGTTGGTACCTATATCTCTGTAATTCAGATAGTAAGACATATCAAGCTATAA 1236 0.3948 MESQINHQLSNSGEPLRGGTSFFKTCFNGINALSGVGILSMPYAVSRGGWLSLILLLIVAIICWYTGLLLQRCMDVHPLIKSYPDIGEVAFGYKGRAMVAIFMYLELYLVAVEFLILEGDNLEKLFPNMNFKIGSLRIGGKAGFIMLTVLAILPTTWLRSLGVLAYISVGGVVASVVLIVCVVWVGEVDGIGFHQKGDIIHWKGLLSSVSLFAFCYCGHPVFPTLRNSMKDKTQFYKVLMVCFIISTITYGSMAIIGYKMFGEYVNSQVTLNLPTNKISTKIAIYITLINPFTKYAVIITPIANAIEESLLLHNKGRRPITILIRTTIVLTTLLVALFVPFFGYVMAFIGALLSVTCSWILPCLCYLKMNKPTQRFRMELVIIIGILFTGSIIAIVGTYISVIQIVRHIKL 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181262g00021 411 PANTHER OS05G0424000 PROTEIN-RELATED 29 398 - -
Stsc181262g00021 411 Pfam Transmembrane amino acid transporter protein 19 402 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181262g00021 Stsc-Chr181262 96731 98530 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181262g00021 18 406 Amino Acid or Auxin Permease AAAP Family AT3G28960 49.871 5.75e-138 399
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181262g00021 K15015 - gmx:100812006 525.013