Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181260g00030 ATGGGGTTGGAAGTTCTTGAGGCTCTTGATTCAGCTCGCACGCAATGGTACCATGTTACAGCCATAGTGATAGCAGGCATGGGGTTCTTCACCGATGCCTACGATCTCTTTTGCATTTCCACCGTTTCAAAGCTCCTCGGTCGCTTGTATTACTATGATCCTAGTACCGGCAAACCAGGAAAGCTACCGCTGACGGTGAACAACTTCGTCACCGGTACGGCCCTCGTGGGAACTCTCGCCGGCCAGTTAGTCTTCGGCTGGCTCGGAGACAAACTGGGGCGAAAGAAGGTGTACGGAGTCACACTCGTTATCATGGTGTTCTGTGCCATATGCTCTGGCCTTTCTTTCGGTTCAACTTCAAAGTCTGTGATGATAACGTTGTGCTTCTTTAGGTTCTGGCTTGGGTTTGGCATTGGTGGAGATTACCCTCTTTCTGCTACTATCATGTCCGAGTACGCAAATAAACGGACACGTGGCGCTTTTATAGCTGCAGTCTTCGCCATGCAAGGCGTCGGAATCATATTTGCCGGAATGGTTTCCATGTTGTTATCCGCCATCTTCCAGAGCAACTTTAAAGCGCCCAAATTCTCGGATAATCATGTGTTGTCCACGCAGCCCGAGGGTGATTTTTTATGGCGGATAGTGCTCATGATCGGTGCCGTCCCCGCAATGCTGACGTACTATTGGAGGATGAAGATGCCTGAAACGGGTCGCTACACTGCCATCATTGAAGGTAATGCGAAGCAAGCTGCTGCTGACATGGCTAGGGTTTTGGACATTGAGATCCAAGCACAACAAGATAAGATAGCAGAGTTCAAAGCCGCAAACGATTACTCTTTAATGTCCGATGAATTCTTCCGGCGACATGGCCGTCACTTGATCGGAACCATGTCCACGTGGTTCTTATTAGACATCGCCTTCTACAGCCAGAATCTTACCCAAAAGGACATTTTTCCAGCAATGGGACTCATAGCAACAGATGTGAATATGAATGCTATAAATGAAGTCTTCCAAACATCGCGTGCGATGTTCGTGATCGCCTTGCTTGGAACCTTCCCTGGTTACTGGTTCACCGTGTTCTTCATCGAGAAGATTGGTCGCTTCAAGATTCAGCTCATCGGTTTCTTCATGATGTCTTTCTTCATGTTCGTCATCGGTGTAGAATACGACTACGTCAAGAATCACAAGAATGTTTTCGCTCTTCTTTATGGGCTGACGTTCTTCTTCGCTAACTTTGGGCCCAACAGCACCACCTTTGTTCTCCCGGCTGAGTTGTTCCCGACGCGCGTGAGGAGCACGTGCCACGCGTTTAGCGCCGCGGCCGGGAAGGCCGGGGCCATGGTAGGAGTTTTTGGGATACAGAGTCTGACTGTGAATAATGACGTCAAGAGCATCAGGAAGGCAATGCTGCTTTTAGCGGTAACGAATTTGATAGGATTCTTCTGCACATTCTTGGTTACTGAGACAAAGGGACGTTCTCTAGAAGAGATTTCTGGTGAAGATGGTGGAGATAGCGAATTCACGGCAACACCACCACCTGATGGTAGAGTCTCTATGACACGACATAGATCTGAAACTGAAACAATGTGA 1590 0.4855 MGLEVLEALDSARTQWYHVTAIVIAGMGFFTDAYDLFCISTVSKLLGRLYYYDPSTGKPGKLPLTVNNFVTGTALVGTLAGQLVFGWLGDKLGRKKVYGVTLVIMVFCAICSGLSFGSTSKSVMITLCFFRFWLGFGIGGDYPLSATIMSEYANKRTRGAFIAAVFAMQGVGIIFAGMVSMLLSAIFQSNFKAPKFSDNHVLSTQPEGDFLWRIVLMIGAVPAMLTYYWRMKMPETGRYTAIIEGNAKQAAADMARVLDIEIQAQQDKIAEFKAANDYSLMSDEFFRRHGRHLIGTMSTWFLLDIAFYSQNLTQKDIFPAMGLIATDVNMNAINEVFQTSRAMFVIALLGTFPGYWFTVFFIEKIGRFKIQLIGFFMMSFFMFVIGVEYDYVKNHKNVFALLYGLTFFFANFGPNSTTFVLPAELFPTRVRSTCHAFSAAAGKAGAMVGVFGIQSLTVNNDVKSIRKAMLLLAVTNLIGFFCTFLVTETKGRSLEEISGEDGGDSEFTATPPPDGRVSMTRHRSETETM 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181260g00030 529 NCBIfam phosphate:H+ symporter 6 500 IPR004738 GO:0005315|GO:0006817|GO:0016020
Stsc181260g00030 529 Gene3D MFS general substrate transporter like domains 17 510 IPR036259 -
Stsc181260g00030 529 Pfam Sugar (and other) transporter 22 498 IPR005828 GO:0016020|GO:0022857|GO:0055085
Stsc181260g00030 529 MobiDBLite consensus disorder prediction 495 529 - -
Stsc181260g00030 529 FunFam Inorganic phosphate transporter 1-6 17 509 - -
Stsc181260g00030 529 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 18 495 - -
Stsc181260g00030 529 SUPERFAMILY MFS general substrate transporter 8 498 IPR036259 -
Stsc181260g00030 529 CDD MFS_PhT 22 490 - -
Stsc181260g00030 529 ProSiteProfiles Major facilitator superfamily (MFS) profile. 21 491 IPR020846 GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181260g00030 Stsc-Chr181260 221875 224964 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181260g00030 3 500 Inorganic Solute Cotransporters AT5G43350 62.378 0.0 649
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181260g00030 K08176 - gmx:100802261 867.455