Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181259g00050 ATGGATTCTGATTCTGTGTTGGCATTGCCTGAGAGCAATGGATTCAAAACAAGGGACACTCAAGATTTTGAGGAAGACTTTGTAGAGAAAGATCCTACTGGCCGCTATCTTAGGTACAATGAAATCTTGGGCAAGGGTGCTTTCAAGACTGTTTATAGGGGCTTTGATGAAGTTGATGGAATAGAAGTTGCTTGGAACCAAGTCAGGATTGATGAACTCTTGAGATCTGCAGATGATGTTGAGAAGTTGTACTCCGAAGTAAACCTATTGAAGTCTCTGAACCATGAAAACATCATTAAGTTCTATAATTCTTGGATTGATGATAAGAAGAAAACTGTTAACATTATTACTGAGCTGTTCACATCTGGAAACCTTAGACAATACCGTAAGAAGCATAGATATGTTGACATGAAAGCAATTAAAGGTTGGGCTCGACAGATTCTTCAAGGTCTGGTATATCTTCACGGTCACAAGCCGCCTATTATTCACAGAGACTTGAAATGTGACAACATCTTTGTAAACGGGAACCATGGAGAAGTCAAGATTGGAGATCTTGGTTTGGCAACTGTTATGCAGCAACCAACTGCTCGAAGTGTTATTGGGACCCCTGAGTTCATGGCTCCAGAACTATATGAAGAGGAATACAATGAACTCGTAGATGTCTATTCTTTTGGGATGTGCATGTTGGAAATGGTTACTTTTGAGTACCCATATAGTGAATGCAAAAATCCAGCCCAAATTTACAAGAAAGTTACCTCTGGAATCAAACCTAATTCCCTTAACAGGGTGAGTGATCCCCAAATTAAGGAGTTTATCAACAAATGTCTTGTTCGTGCGTCTGAGAGATTGTCCGCAGAGGACCTTCTTAAAGACCCATTTCTGCAAGTCGAGTGTTCCAAGGATCCAACCCTTAGTCCCTTAAACTCACCTAATAAATCTCCAATGGCTATAGATAAGCCAAAGTCTGGTCCTTCATCTATGGACTTGGAGGCTGACTGCAAAAAAGTGTCTGTGAGTAACTGTGCTGAAAACAGCCATGGAAGTTCACTTTGTCCACTTCTTGAAGTTCGGCGGACATATAAAAACAATGAGTTTAGATTGAAAGGGACCAAAAATGATGATATCTCGGTGTCACTAATCTTACGTATTGCTGATTCTTGTGGTCAGGTAAGGAATATACATTTCCTCTTCTACCTTGAGACGGATACTGCAGTTTCTGTGGCCTCAGAGATGGTTGAAAATTTGGAGCTATCAGATCATGATGTAGCCTTCATAGCTGAGCTTATTGATTACTTGATAATGAAGCTATTACCTCAGTGTAAGCCCTCAAATGAAGGATATAATCATAGTCATTTTCCTGTGCTAAGCAGTCCTCGCTCTGAAATGGTTTTTGATCAACACAACGCACAGGGTCCCGTCCAAACCAATGCTCCCTCTGAATTGGTTTCCAATCAAGAGAACTTGATTCCGCTTGGTTCTATCCAAAGAGAAGATTTTGAGACAGCCAATGGAAGCTTCATGTTTAACAATGGTGATAATGCTGTTTTTGTTGGTGAGTATAATTCTTCTCCTAGTTTGACTAGCTTGGAAGATCAAGACTGGCAAGACCCGTCGGAGTCTGATACAGCCGCTGAAGATGCTTGCATGAAAAATGAATATTGTTTGGATTCTGATGCTGATGGGAGTGATAAGGGTTTGAGTTGGTCCAACTTAGAAATGCAGTTGGCAGATACATTCTGGAAATGTTGTAAATTGCAGGCTACAAACTGCTGTGCTGCAGAAAGCATTGTACTGAGTGGAATCTCAAAGAACTCTTCTCACTCTACAATCCCAAACCTTTGGGGAACACCTAATGCTTTGAGCTTGACAAGCAGCGAATCCTCTTTGTCTACAACCGACAAAGACATCGATCATGAGCTAAAGCATGAACTCGAAGCGATTGAATCACAGTATCAACTTTGGTTCCAAGAACTTTCAAGACAGAAGTTGGAAGCATTGGAAGCCACCAGAAAGAAATGGACAGCCAGGAAGAAACTGTTGAAGCCGCCGTCCATACTCAACCTCCGTCAAACTGGCACCGTTAAGGAATACCGCGACCTCTTCGAGAAACTGAGCGACGTCGTTTTGAGGTCGATCTTCGTAAACGGGCTTAGGGAGGATGTGAAGGAGGAGCTGAGTTCCTTCGAGGCGGAGTCACTCTCTGATCTCATGGACCTCTCGGAAGTGGCCGAAGCGAGGTGCCGGCGCCCGAAGGATGGGTTGATGAAGTTCTGGGGGAAGATCGAGGGAAGAAGAGTGGTGATGGTGGTTTCTACTGGTTCTAGCAACAGTTTCATCGCGAAGAGGGTAGTGACGGAGCTGAGGCTCCCGACGTCAGAAACTCGTGAGCGTTTCGCTTACGTGGATGGAACCGTGGCGGAAAACGGAGGGTTGTGCAAGGGGTTAACGGTTAAGGTTCAGGGG 2463 0.4352 MDSDSVLALPESNGFKTRDTQDFEEDFVEKDPTGRYLRYNEILGKGAFKTVYRGFDEVDGIEVAWNQVRIDELLRSADDVEKLYSEVNLLKSLNHENIIKFYNSWIDDKKKTVNIITELFTSGNLRQYRKKHRYVDMKAIKGWARQILQGLVYLHGHKPPIIHRDLKCDNIFVNGNHGEVKIGDLGLATVMQQPTARSVIGTPEFMAPELYEEEYNELVDVYSFGMCMLEMVTFEYPYSECKNPAQIYKKVTSGIKPNSLNRVSDPQIKEFINKCLVRASERLSAEDLLKDPFLQVECSKDPTLSPLNSPNKSPMAIDKPKSGPSSMDLEADCKKVSVSNCAENSHGSSLCPLLEVRRTYKNNEFRLKGTKNDDISVSLILRIADSCGQVRNIHFLFYLETDTAVSVASEMVENLELSDHDVAFIAELIDYLIMKLLPQCKPSNEGYNHSHFPVLSSPRSEMVFDQHNAQGPVQTNAPSELVSNQENLIPLGSIQREDFETANGSFMFNNGDNAVFVGEYNSSPSLTSLEDQDWQDPSESDTAAEDACMKNEYCLDSDADGSDKGLSWSNLEMQLADTFWKCCKLQATNCCAAESIVLSGISKNSSHSTIPNLWGTPNALSLTSSESSLSTTDKDIDHELKHELEAIESQYQLWFQELSRQKLEALEATRKKWTARKKLLKPPSILNLRQTGTVKEYRDLFEKLSDVVLRSIFVNGLREDVKEELSSFEAESLSDLMDLSEVAEARCRRPKDGLMKFWGKIEGRRVVMVVSTGSSNSFIAKRVVTELRLPTSETRERFAYVDGTVAENGGLCKGLTVKVQG 821
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181259g00050 821 ProSitePatterns Serine/Threonine protein kinases active-site signature. 161 173 IPR008271 GO:0004672|GO:0006468
Stsc181259g00050 821 SUPERFAMILY Protein kinase-like (PK-like) 38 295 IPR011009 -
Stsc181259g00050 821 CDD retropepsin_like 757 821 - -
Stsc181259g00050 821 SMART serkin_6 37 294 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc181259g00050 821 FunFam probable serine/threonine-protein kinase WNK9 120 299 - -
Stsc181259g00050 821 Pfam Oxidative-stress-responsive kinase 1 C-terminal domain 377 433 IPR024678 GO:0004674|GO:0005524
Stsc181259g00050 821 Gene3D Transferase(Phosphotransferase) domain 1 120 300 - -
Stsc181259g00050 821 Gene3D - 375 458 - -
Stsc181259g00050 821 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 19 677 - -
Stsc181259g00050 821 MobiDBLite consensus disorder prediction 304 328 - -
Stsc181259g00050 821 Gene3D Phosphorylase Kinase; domain 1 20 118 - -
Stsc181259g00050 821 CDD STKc_WNK 35 294 - -
Stsc181259g00050 821 ProSiteProfiles Protein kinase domain profile. 37 294 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc181259g00050 821 FunFam Probable serine/threonine-protein kinase WNK1 22 118 - -
Stsc181259g00050 821 Pfam Protein kinase domain 40 294 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181259g00050 Stsc-Chr181259 266363 270041 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181259g00050 24 436 MAP Kinase Kinase Kinase AT1G64630 62.651 3.17e-174 511
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Stsc181259g00050 Pkinase 5.1e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181259g00050 K08867 - qsa:O6P43_027404 822.387