Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181259g00038 ATGTGGTGGACACTCAAAATGGAGCACCATCACCCACCGCCCACCAATAAAGCTGGCACACGCCACCCCCTCTACCGGGGCGTCAGGAAGCGCCGCTGGGGCAAGTGGGTCTCCGAGATTCGACAGCCTCGCAAGAAATCCCGCATATGGCTCGGTTCCTTCCCTGTCCCGGAGATGGCTGCCAAGGCATACGATGTTGCAGCCTACTGCCTTAAAGGCCGCAAGGCGCAGCTCAACTTCCCCGACCAGCTCCACCTCCTCCCGCTCCTCCCCTCCACCTGCTCCCCCAGGGACATCCAGGCCGCAGCCGCCAAGGCTGCCAACTCCATGAAGGATGCTGTCACTTCCACCCGCACCGCCAATGATGATCAGGATGATGATTTTTGGGGGGAGATTGAGTTGCCCGAGCTCATGGACGGCGAGTGTGGTTACTGGAGCTCTCCCAGTGGATCTTCCTGGACTACTTCTTCCGGCGACATGACGGTGTGGCCGGAGGTGGAGCAACAGCAACCGTTCACGGCGTGCCTATAA 531 0.6045 MWWTLKMEHHHPPPTNKAGTRHPLYRGVRKRRWGKWVSEIRQPRKKSRIWLGSFPVPEMAAKAYDVAAYCLKGRKAQLNFPDQLHLLPLLPSTCSPRDIQAAAAKAANSMKDAVTSTRTANDDQDDDFWGEIELPELMDGECGYWSSPSGSSWTTSSGDMTVWPEVEQQQPFTACL 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181259g00038 176 CDD AP2 23 83 IPR001471 GO:0003700|GO:0006355
Stsc181259g00038 176 FunFam Ethylene-responsive transcription factor 2 23 82 - -
Stsc181259g00038 176 ProSiteProfiles AP2/ERF domain profile. 24 81 IPR001471 GO:0003700|GO:0006355
Stsc181259g00038 176 MobiDBLite consensus disorder prediction 1 22 - -
Stsc181259g00038 176 Pfam AP2 domain 23 73 IPR001471 GO:0003700|GO:0006355
Stsc181259g00038 176 Gene3D AP2/ERF domain 24 82 IPR036955 GO:0003700|GO:0006355
Stsc181259g00038 176 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 15 140 - -
Stsc181259g00038 176 SMART rav1_2 24 87 IPR001471 GO:0003700|GO:0006355
Stsc181259g00038 176 SUPERFAMILY DNA-binding domain 24 83 IPR016177 GO:0003677
Stsc181259g00038 176 PRINTS Ethylene responsive element binding protein signature 63 83 IPR001471 GO:0003700|GO:0006355
Stsc181259g00038 176 PRINTS Ethylene responsive element binding protein signature 25 36 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181259g00038 Stsc-Chr181259 191670 192409 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181259g00038 15 176 AP2-EREBP Transcription Factor Family AT1G01250 60.947 1.45e-53 167
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Stsc181259g00038 AP2 4.1e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181259g00038 K09286 - gmx:100819971 220.32