Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181258g00044 ATGTCTAGTAAGAAGGTTATGACATCAATGAAGAAGGAGGAGAATCCAGATTTGCAGAAGCAGATGGGGTGCATCCGTGGATTCTTTCAGCTCTTTGATCATCGTCAATGGTTCCTTACAAACAACAACTATGATACTACTCCATCCGGTGTAACCAATAATGAAGCCAAAGAGCTGAACAATAAGATGCTAAATGCAATGGCTAGCAATAATGTGAAGGTTGCAAGAGAGAATCAACAATTCTCCACAGAATCATCAGGAACTTCCAACTCGTCATCCTCTTGCTCATCTAGCATGTCATCCCTAGAGTTCAACAGAACAATTCTCAGCCAAATCAAGATCCAAGAGAACTACAATTCAGAAGCAGCAGTGAAACAACCCAACACCCCAGCTCATGAGTCCCTGGATTTCTACGATATTGTCAAAGACTCGATGCAGAGAGAACCACGAGCGTTATCAGTCAAAATTGCAGCTAAAGAGGAAACGAAGGGCCGTATCTTGAAACACATTGACTCTCCCCGGCCTTTGCAGACGCCTAAATCAGCCACAATCACCAATGAACCTCTCCATATTCTTGGTAAGTCTAGGAGAAAGCCGTGGGAGTCGCCTCGACGCTCTTATGATGAGAGGGAGATACAACAATTATTAAAGCACAAGGAAATCCCAAGGCTTTCCTTGGACAGCAGAGAAGGATCCAATAAGGGCTATAATGAAGCAACTAGATCACAAAATCTCTTGAAGGATGCAGAGACAGGGTATGAGAGTTCGAGCACAATGCTTAGGCAGCAGCCGCACGAACCGGAAACTCCTAAGAGACCATCCAGTGTTGTAGCAAAGTTAATGGGACTGGAAGAACTCCCAGATTGCACACAAACTTGCTATACTCCTTCGCAGATGCCTAGCATAAGCGAAGGATATAATCAACACAAAAGTCCAGTTTCCCCCATAACAAGCAAGCAAAGCTCGGTGATATCTAGAAGGGATGATGCCTTAATCAGAAAAGCAACACCGTATTCACGATTTTCACTTGAACCAATTCCATGGGGGCAACCTGATGCAAGCCAAGATTCTGATTTACAAGTTTCCAAGGGAAGTGAGACTTCAACAACAGCTTCAAACTCCTCCAACTCTGTATATGGTGAAATTGAGAAAAGGATTGCAGATCTTCAGTTTAAAAATTCAGGAAAGGATCTCAGAGCCCTTAAGCAGATTCTGGATGCAATGCAGAGATATAAAGATTCACTAGATATTACAAGAGACAGGGAAACAAATTACCCTTCTGATAAAAGTCTCAGTGAAAGCTCGAAATTACGAAGCCCAAGACAACAGACCAACACAACAGTTGTCACTGATGATACTTCAAATTCACCCCAGGGTAGAAAATTTCCAATTGTCATCATGAAGCCAGCAGAAATCTCAAGGAAACCCAATGTCGCAACCAAAGACATGATTAATGGAAAATCAGGCTGCATCAAGTTTTCCGCAGATGGAAGATTGATTGACAAGCTTGAAAGTAAAACCGCAAAAGGAACCAGTCCAACAAATCCTTTGAGTCAACGCTTCCATTCTGCAGATAAGAGTAACACGATGAAAACTTCAAAATTAATGCAGGCCTCAAAAGTCCCTCAGATCATCAATGGAGAGAAGACCAATAACTCCAGCAACACAGCAGAGACCAGAAGCCCAAGAGTACAAAATAAGTTTGGTTTTGAGAGACATTCACCAATAAACCAATCATCAGAGTCCAGAAGTAACAGAAGACAACACAAGCAATCACCGGAATTATTGTCCCCAAGTTCAACCCCGAGGCAAAAAGCATCTACTTTGCAGCATAGAAATGAAGGCTTCAGCAAGATCCGGTGTCAAAGGAGGAACTTTAAGCATCAAGTTGACATTATTTCCTCCAATGTTGACAGCAACAGAAGCATTGATTCTCAACGTGACATAGAGGGCACCCAAGCAGATCATTCTGGAAGCAACTATAGCATCTCATTTCAAGAGGAGACTAACATGAATCAAAATACCACTGCAGAAGACCTAAGCAAGGAAAGTGCTATGGCCACAGTAACAGTTACTTCGGAACAACAGAGTCCAGTTTCTGTTCTTGATCCACGATTCTACAATGAGGATCCACCTTCTCCAATTAAAAAGAAGATAGAATCCTCAAAAGATTTAGATGAAGCTTTAGCCACTTCTGATAACATAGGGCATGCATCGGATAATTTGGTTCAAGGTCTTCGGCAAAATGATGATAATAATGAGAAATTCACCAATTGCAGAGAGAGAAAAGATTCTGACCGTAAATACATAGCAGAAATATTGCTCGCATCAGGCCTGCTCAGTAGCCCCAGCTCAATCCAGGCAGTTCATTCCCCAGGTCACATAATAAACCCAAAGTTGTTCTTTGCACTTGAACTATTCAAGACAAACAAGCTGCAGTTCAATATGAAGCACAATGACGGGAACATGCTCAGGATAAACAATCCTGAAGAAATGCAAAGAAAACTCATATTTGATGTCGTTAATGAGATTCTACTGCAAAAACTAATACTGGAGAGTCCTACTACACTGCGGTGCCTGCCAAATCAGCCAGAAGTAGTAGATCGCAAACTAAATGGACGGCAACTTCTGGATGAGCTTTGCACAGAAATTGATAATTTACAACCCAAAAACACAAACTTTGACTTGGCTAATGAGGATGAGGATGAGGATGAGGATTTGACAAGTCTCTTATGGGGAGATTTGGTACATCAACCCAAAATTTCAACAGAGTGCAACACTGAGATGCCAAATGTTGTGTTGGATATTGAACGGTTGATCTTTAAAGATTTGATTACAGAAGTTGTGAGAGGTGAAGTAGCTAACCATCCAGGTAGGCATTGCAGACAACTGCTGTTTCCGAATTAG 2907 0.4183 MSSKKVMTSMKKEENPDLQKQMGCIRGFFQLFDHRQWFLTNNNYDTTPSGVTNNEAKELNNKMLNAMASNNVKVARENQQFSTESSGTSNSSSSCSSSMSSLEFNRTILSQIKIQENYNSEAAVKQPNTPAHESLDFYDIVKDSMQREPRALSVKIAAKEETKGRILKHIDSPRPLQTPKSATITNEPLHILGKSRRKPWESPRRSYDEREIQQLLKHKEIPRLSLDSREGSNKGYNEATRSQNLLKDAETGYESSSTMLRQQPHEPETPKRPSSVVAKLMGLEELPDCTQTCYTPSQMPSISEGYNQHKSPVSPITSKQSSVISRRDDALIRKATPYSRFSLEPIPWGQPDASQDSDLQVSKGSETSTTASNSSNSVYGEIEKRIADLQFKNSGKDLRALKQILDAMQRYKDSLDITRDRETNYPSDKSLSESSKLRSPRQQTNTTVVTDDTSNSPQGRKFPIVIMKPAEISRKPNVATKDMINGKSGCIKFSADGRLIDKLESKTAKGTSPTNPLSQRFHSADKSNTMKTSKLMQASKVPQIINGEKTNNSSNTAETRSPRVQNKFGFERHSPINQSSESRSNRRQHKQSPELLSPSSTPRQKASTLQHRNEGFSKIRCQRRNFKHQVDIISSNVDSNRSIDSQRDIEGTQADHSGSNYSISFQEETNMNQNTTAEDLSKESAMATVTVTSEQQSPVSVLDPRFYNEDPPSPIKKKIESSKDLDEALATSDNIGHASDNLVQGLRQNDDNNEKFTNCRERKDSDRKYIAEILLASGLLSSPSSIQAVHSPGHIINPKLFFALELFKTNKLQFNMKHNDGNMLRINNPEEMQRKLIFDVVNEILLQKLILESPTTLRCLPNQPEVVDRKLNGRQLLDELCTEIDNLQPKNTNFDLANEDEDEDEDLTSLLWGDLVHQPKISTECNTEMPNVVLDIERLIFKDLITEVVRGEVANHPGRHCRQLLFPN 968
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181258g00044 968 MobiDBLite consensus disorder prediction 506 622 - -
Stsc181258g00044 968 MobiDBLite consensus disorder prediction 230 264 - -
Stsc181258g00044 968 MobiDBLite consensus disorder prediction 342 377 - -
Stsc181258g00044 968 MobiDBLite consensus disorder prediction 637 657 - -
Stsc181258g00044 968 MobiDBLite consensus disorder prediction 353 377 - -
Stsc181258g00044 968 MobiDBLite consensus disorder prediction 591 615 - -
Stsc181258g00044 968 MobiDBLite consensus disorder prediction 300 328 - -
Stsc181258g00044 968 MobiDBLite consensus disorder prediction 77 97 - -
Stsc181258g00044 968 Pfam Domain of unknown function (DUF4378) 767 947 IPR025486 -
Stsc181258g00044 968 MobiDBLite consensus disorder prediction 507 563 - -
Stsc181258g00044 968 PANTHER LONGIFOLIA PROTEIN 4 964 IPR033334 GO:0051513
Stsc181258g00044 968 MobiDBLite consensus disorder prediction 222 274 - -
Stsc181258g00044 968 MobiDBLite consensus disorder prediction 428 460 - -
Stsc181258g00044 968 MobiDBLite consensus disorder prediction 300 325 - -
Stsc181258g00044 968 MobiDBLite consensus disorder prediction 417 462 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181258g00044 Stsc-Chr181258 257912 261967 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181258g00044 128 954 TRM (TON1 Recruiting Motif) Superfamily AT1G74160 30.230 1.21e-71 253
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181258g00044 - - ahf:112783057 1478