Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181258g00029 ATGAACTTGAAGAGTTATTATAGCATAACCTCTGCTATATCCACTATCCTTTACCTTTATTTCTTGTTCCTCTCCAACTTAGCCATATGCATTGAAGCTTATGTTCCAGTTGATAGCTTCAGCATCAACTGTGGCTCAACTGGCAAATCCTCCGATGGTGAAAGGTCATGGGAAGGAGACATGGACTCAAAGCTCTTAACTCTTCAACACACAAACACCAAAGTTGCTGAACCAACCACACAACCTTCTCCAAATCAAGTACCCTACACCACTGCACGCTTGTCTAACTCTGAATTCAGTTATTCCTTCCCAGTCACACTTGGCCGCAAATTCGTACGTCTCTTCTTCTACCCTGCTTCTTACCCTGGCTTCGACCGTTATAACGCCGTCTTCACTGTCAAATCGGAGGGTTTCACACTCCTCAAGGATTTCAATGCTTCGCTTAACGCCGATGCTGCAAACAGTGACACTATATTTAAAGAGTACATAATCAACGTAGATGATGTGCAGAGGATCAACCTGACCTTCACCCCAAACACATCCCATCCAAATTCATATGCATTTGTGAATGGAATAGAGGTGGTTTCCATGCCCACTGATCTCTACTTCACTGAACCCTCTGGACAACAAATTGTATTGGTGGGTCATCCAGGTGTCCCATACAGTTTGCAAAGCAGTAGCGCCCTGGAGACAGATTACAGAATCAAAGTTGGCGGCAACACAATCACACCAAAAGGCGATACTGGCATGCTGCGCAACTGGGAAGGAGATGATGCCGATTATTTAACAACGTCATCTCCTGATCAGGCTAGTCTACCCGGTGATTTGACTGGAAAGATGAACATCACAGTGAAACCTGATTATGAAGCACCCATTGAACTCTACAGAACATCTCGAGATATGGGCAGGAACAAAACTTTCAACCAAATGAATAATTTGACTTGGGAGTTTCCCGTTGACTCTGGCTTCAACTACATGATCAGGCTTCACTTTTGCGAGCTAGACCCAAACATTACCGACCCCGGTGAAAGACGGTTCGTCATCTACATAGCAGGCCAGTTGGCAGATGAACATGGCGATGTTCTAAAATGGAGCAAGCAAAAGGGAATTGCTGTACAGAGAGACTATGCACTTATCATCCAAGGGCAAGGGACTACTCAGGACAAGTTTAACCTCTCACTCCAATTACATCCTTTATCTATAAGCAGATCGTACAGCGACCCTTTCTTGAACGGCCTCGAAATCTTCAAGATCAGTGACCCCGCTTTGTACAGCCTCGCCGGGCCGAACCCGAGCCCGGTTCAACAAAACCCACCAAACCCAACCAACTCAAAGGGCAGCAGCAGCAGCAGCAACACGGCGACCATAATCGGTGCCGTGGTGGGCGCAGCATGCGGCGTCGTTTTGCTCTCAGCTCTCGCCGTCTTCCTCCTGAGCCGACGCAACAAGACAAAGACGAGCGTGATCCTGAAGGATTCCAAGTCCAACAACACCTCCAAGTGGGGCCCACTCTCCTTCGCCACGACCAAGTCAACCAGCACACAGAAATCCACACTCCCCTCCGACCTCTGCCGCCACTTCTCCCTCCTCGAGATCCGCGCCGCCACAAACAACTTCGACGAACTCTTCATCGTCGGCTCCGGCGGGTTCGGCCACGTGTACAAGGGCTACGTCGACGGTGGAACCACCCCCGTCGCCATCAAAAGGCTGAAGCCAGGGTCCCAGCAGGGAGAACACGAGTTCATGAACGAAATCGAGATGCTCTCGCAGCTTCGCCACCTTCATCTCGTTTCGCTAATCGGTTACTGCAACGAGAGCAACGAGATGATCCTCGTGTACGATTTCATGGACCGTGGAACCCTCCGCGACCATCTCTACAACACCGAAAACCCTTCCATCAAATGGAAGCAGCGGTTACAGATCTGCATCGGTGCAGCGCGTGGTCTACACTACCTTCATACAGGCGCGAAGCACACGATCATTCACCGCGACGTGAAAACCACCAACATTTTGTTGGATGATAAGTGGGTGGCTAAGGTTTCTGATTTTGGGTTATCGAGAATTGGGCCTACCGGTATGTCTAAGGCCCATGTGAGCACCGTAGTGAAGGGTAGCGTTGGGTATTTGGATCCCGAGTACTATAAACGACAGCGTTTAACGGAGAAGTCTGACGTGTACTCTTTTGGTGTGGTGTTGTTTGAGATACTGTGCGCGCGGCCGCCTCTAATCCGTACTGCTGAGAAGAAACAGGTGTCGCTTGTTGATTGGGCGAGGCACTGCTGGAATAACGGTTTGTTGGGTCAGATTGTGGACCCCAGTTTGAAAGGCACGATTGCTCCTGAGTGTTTGAGGAAGTTCGGTGAGATTGCGATTAGTTGTTTGTTGGATGATGGAACGCTGAGGCCGTCCATGAACGACGTCGTTTGGATGCTGGAGTTTGCGTTGCAGCTTCAAGAGAGTGCGGAGCAGCGTGACCGTGCGATTGGGATCGGGGTACCTGATGGCGATGACGATGAGGATCGTGCGGTGGAGAAGAGAGAAGAGAGTGATGACATGTTTAGTAGTGGAACGAGCGTTGGGCAGGTTTCTGATTTTAACAAGAGTAGCGGTGTGAGTATGATGAGTAGCAGTGGAGATAATAGCTATAGTAAGGATACTGATAAGTTTTTGTCTGGAACTGTTTTCTCTGAGATTATGGATCCAAAGGCTCGCTGA 2715 0.4932 MNLKSYYSITSAISTILYLYFLFLSNLAICIEAYVPVDSFSINCGSTGKSSDGERSWEGDMDSKLLTLQHTNTKVAEPTTQPSPNQVPYTTARLSNSEFSYSFPVTLGRKFVRLFFYPASYPGFDRYNAVFTVKSEGFTLLKDFNASLNADAANSDTIFKEYIINVDDVQRINLTFTPNTSHPNSYAFVNGIEVVSMPTDLYFTEPSGQQIVLVGHPGVPYSLQSSSALETDYRIKVGGNTITPKGDTGMLRNWEGDDADYLTTSSPDQASLPGDLTGKMNITVKPDYEAPIELYRTSRDMGRNKTFNQMNNLTWEFPVDSGFNYMIRLHFCELDPNITDPGERRFVIYIAGQLADEHGDVLKWSKQKGIAVQRDYALIIQGQGTTQDKFNLSLQLHPLSISRSYSDPFLNGLEIFKISDPALYSLAGPNPSPVQQNPPNPTNSKGSSSSSNTATIIGAVVGAACGVVLLSALAVFLLSRRNKTKTSVILKDSKSNNTSKWGPLSFATTKSTSTQKSTLPSDLCRHFSLLEIRAATNNFDELFIVGSGGFGHVYKGYVDGGTTPVAIKRLKPGSQQGEHEFMNEIEMLSQLRHLHLVSLIGYCNESNEMILVYDFMDRGTLRDHLYNTENPSIKWKQRLQICIGAARGLHYLHTGAKHTIIHRDVKTTNILLDDKWVAKVSDFGLSRIGPTGMSKAHVSTVVKGSVGYLDPEYYKRQRLTEKSDVYSFGVVLFEILCARPPLIRTAEKKQVSLVDWARHCWNNGLLGQIVDPSLKGTIAPECLRKFGEIAISCLLDDGTLRPSMNDVVWMLEFALQLQESAEQRDRAIGIGVPDGDDDEDRAVEKREESDDMFSSGTSVGQVSDFNKSSGVSMMSSSGDNSYSKDTDKFLSGTVFSEIMDPKAR 904
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181258g00029 904 ProSitePatterns Serine/Threonine protein kinases active-site signature. 660 672 IPR008271 GO:0004672|GO:0006468
Stsc181258g00029 904 MobiDBLite consensus disorder prediction 829 852 - -
Stsc181258g00029 904 Gene3D Transferase(Phosphotransferase) domain 1 616 831 - -
Stsc181258g00029 904 CDD STKc_IRAK 545 812 - -
Stsc181258g00029 904 PANTHER OS03G0124300 PROTEIN-RELATED 17 491 IPR046957 GO:0004672
Stsc181258g00029 904 SUPERFAMILY Protein kinase-like (PK-like) 512 814 IPR011009 -
Stsc181258g00029 904 FunFam Receptor-like protein kinase FERONIA 616 829 - -
Stsc181258g00029 904 ProSiteProfiles Protein kinase domain profile. 539 814 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc181258g00029 904 FunFam FERONIA receptor-like kinase 227 419 - -
Stsc181258g00029 904 Gene3D - 228 419 - -
Stsc181258g00029 904 Gene3D - 39 199 - -
Stsc181258g00029 904 FunFam FERONIA receptor-like kinase 39 198 - -
Stsc181258g00029 904 MobiDBLite consensus disorder prediction 427 449 - -
Stsc181258g00029 904 Gene3D Phosphorylase Kinase; domain 1 502 615 - -
Stsc181258g00029 904 MobiDBLite consensus disorder prediction 828 883 - -
Stsc181258g00029 904 FunFam Receptor-like protein kinase FERONIA 511 615 - -
Stsc181258g00029 904 Pfam Protein tyrosine and serine/threonine kinase 545 808 IPR001245 GO:0004672|GO:0006468
Stsc181258g00029 904 SMART serkin_6 539 814 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc181258g00029 904 ProSitePatterns Protein kinases ATP-binding region signature. 545 568 IPR017441 GO:0005524
Stsc181258g00029 904 MobiDBLite consensus disorder prediction 853 883 - -
Stsc181258g00029 904 Pfam Malectin-like domain 42 418 IPR024788 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181258g00029 Stsc-Chr181258 194055 196769 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181258g00029 29 904 Receptor kinase-like Gene Family AT3G51550 50.000 0.0 795
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Stsc181258g00029 Malectin_like 6.8e-40 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181258g00029 - - gsj:114381619 1107.82