Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181258g00024 ATGGCCTCTTCCAATGCTCGCGGCACCACCAACTCCTTCGGTAACACTGAGATTAACTGGGACAAGCTTGATAAAACGAAGTTCTATGTTGTTGGTGCTGGGCTCTTTACGGGTGTTACGGTGGCTCTCTACCCGGTTTCTGTTGTGAAAACTAGGATGCAGGTTGCTACAAGGGATACTGTGGAGAGGAATGCGTTTTCTGTAGTGAAAGGGCTACTTAAATCGGATGGCATTCCTGGTTTGTATAAAGGGTTCGGCACAGTTATCACCGGAGCAATTCCTGCTAGGATCATATTCCTCACAACTCTAGAAACCACGAAGGTGGCTGCCTTCAAGATGCTTGAGCCGTTTGCACTCTCTGAAACTACCCAGGCTGCCATAGCGAATGGAGTTGCGGGCATGACATCATCGCTTTTTTCACAAGCTGTGTTTGTACCAATTGATGTGATTAGCCAAAAATTGATGGTGCAAGGATACTCAGGGCATACCCAATATAGTGGGGGTCTAGATGTTGTTCGGAAGGTGTTAAGAGCTGATGGCATCAGGGGATTATATAGGGGGTTTGGTCTATCTGTTATGACTTATTCACCATCCAGTGCTGTCTGGTGGGCAAGTTATGGTTCAAGCCAACGGTTCATATGGAGAGCCTTGGGACATAGTGTCGAACATGAGGAAGGCACTCCTAGTTTGCCAAAGATTGTATTAGTTCAGGCTACTGGAGGGATTATTGCTGGTGCGACTGCATCCTGCATTACAACTCCATTGGATACTATCAAGACACGGTTACAGGTTATGGGACATGAAAAGAGAACCTCTGTAAAACAAGTTGTGAGAGACTTAGTCAGTGAGGATGGTTGGAAAGGTCTATATAGAGGCTTGGGCCCAAGATTTTTCAGCATGTCAGCATGGGGTACTTCAATGATATTAGCTTATGAATATTTGAAGCGTTTATGTGCAAAAGATGATTAG 969 0.4541 MASSNARGTTNSFGNTEINWDKLDKTKFYVVGAGLFTGVTVALYPVSVVKTRMQVATRDTVERNAFSVVKGLLKSDGIPGLYKGFGTVITGAIPARIIFLTTLETTKVAAFKMLEPFALSETTQAAIANGVAGMTSSLFSQAVFVPIDVISQKLMVQGYSGHTQYSGGLDVVRKVLRADGIRGLYRGFGLSVMTYSPSSAVWWASYGSSQRFIWRALGHSVEHEEGTPSLPKIVLVQATGGIIAGATASCITTPLDTIKTRLQVMGHEKRTSVKQVVRDLVSEDGWKGLYRGLGPRFFSMSAWGTSMILAYEYLKRLCAKDD 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181258g00024 322 Pfam Mitochondrial carrier protein 236 321 IPR018108 -
Stsc181258g00024 322 Pfam Mitochondrial carrier protein 126 214 IPR018108 -
Stsc181258g00024 322 Pfam Mitochondrial carrier protein 33 111 IPR018108 -
Stsc181258g00024 322 ProSiteProfiles Solute carrier (Solcar) repeat profile. 25 109 IPR018108 -
Stsc181258g00024 322 ProSiteProfiles Solute carrier (Solcar) repeat profile. 124 212 IPR018108 -
Stsc181258g00024 322 PRINTS Mitochondrial carrier protein signature 241 263 IPR002067 GO:0055085
Stsc181258g00024 322 PRINTS Mitochondrial carrier protein signature 185 203 IPR002067 GO:0055085
Stsc181258g00024 322 PRINTS Mitochondrial carrier protein signature 41 55 IPR002067 GO:0055085
Stsc181258g00024 322 ProSiteProfiles Solute carrier (Solcar) repeat profile. 232 317 IPR018108 -
Stsc181258g00024 322 Gene3D Mitochondrial carrier domain 29 322 IPR023395 -
Stsc181258g00024 322 FunFam Mitochondrial substrate carrier family protein 29 321 - -
Stsc181258g00024 322 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 9 321 - -
Stsc181258g00024 322 SUPERFAMILY Mitochondrial carrier 21 314 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181258g00024 Stsc-Chr181258 173933 177809 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181258g00024 18 322 Chloroplast and Mitochondria Gene Families AT5G15640 76.221 4.63e-174 483
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181258g00024 K15121 - qsa:O6P43_009187 545.814