Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181258g00021 ATGAGGCTTGTGATCTTAGTTCTTTGTGTCATTGTGCTGTTCTCCTATGCAGATGCTTATGATCCTTTGGATCCAAATGGGAATGTAACAATCAAATGGGATATAGTTTCTTGGACTGCAGATGGCTATGTGGCCGACGTAACGTTGTACAACTTCCAAGTGTTCCGGCACATAATGAACCCCGGATGGACCATGGGATGGACATGGGCAAAGAAAGAAGTGATATGGTCAATGGTGGGAGCTCAAACAACAGAGCAAGGTGACTGCTCAAAGTTCAAAGGCAACATACCTCATTGTTGCAAGAAAATCCCAACAGTTGTGGACTTGCTCCCTGGTGTCCCTTACAACCAGCAATTCCAGAATTGTTGTAAGGGTGGAGTTGTCGCGGCGTGGGGCCAAGACCCTTCAATGGCTATCTCTTCATTCCAAATCAGTGTTGGCCAAGCTGGTACCTCCAACAAGACTGTTAAACTCCCCAAGAATTTCACTCTCTTGGCTCCCGGACCGGGCTACACTTGCGGCCCGGCCAAGGTTGTTCCTTCCACCACTTTCCTTACTCAGGACAAGCGGCGCAAGACTCAAGCCTTGATGACATGGAATGTTACCTGCACATACTCACAATTTCTAGCAAGAAAGAACCCTGCTTGTTGTGTTTCTTTGTCATCCTTCTACAATGAAACTATCACTCCTTGTCCCTCTTGTGCATGTGGCTGCCAGAACAAAAAGAATTGTGTCAAGAGTGACTCTAAAATTCTGAGCATGGTTGGTGTTCACACTCCAAAGAAAGACAATGAACCTTTGATGCAGTGCACTCACCATATGTGTCCAATAAGGGTACATTGGCATGTGAAGCAAAACTATAAGGACTATTGGAGAGTCAAGATTGCCATAACAAATTTCAATTACAGGATGAACTATTCCCTCTGGACTCTTGCAATTCAGCATCCAAATCTCAACAATGTCACACAAGTCTTCAGCTTTGATTACAAGCCTATACTTCCCTATGAGTCCATCAATGATACTGGCATGTTCTTTGGCATGAAATACTACAATGATCTATTAATGGAAGCTGGACCAACTGGGAATGTTCAATCAGAAGTGCTTCTTCAGAAGGACAAGGACACATTCACTTTCAAGCAAGGATGGGCATTTCCAAGAAAAGTATACTTTAATGGTGATGAATGCATGCTTCCACCACCAGATTCCTATCCATTCCTCCCTAATTCTGCACCTATTAGACTAAGTGCCTTCCCAGCACTCATTTTATCATTGATATTCTTGCTAGTTTTATGA 1293 0.437 MRLVILVLCVIVLFSYADAYDPLDPNGNVTIKWDIVSWTADGYVADVTLYNFQVFRHIMNPGWTMGWTWAKKEVIWSMVGAQTTEQGDCSKFKGNIPHCCKKIPTVVDLLPGVPYNQQFQNCCKGGVVAAWGQDPSMAISSFQISVGQAGTSNKTVKLPKNFTLLAPGPGYTCGPAKVVPSTTFLTQDKRRKTQALMTWNVTCTYSQFLARKNPACCVSLSSFYNETITPCPSCACGCQNKKNCVKSDSKILSMVGVHTPKKDNEPLMQCTHHMCPIRVHWHVKQNYKDYWRVKIAITNFNYRMNYSLWTLAIQHPNLNNVTQVFSFDYKPILPYESINDTGMFFGMKYYNDLLMEAGPTGNVQSEVLLQKDKDTFTFKQGWAFPRKVYFNGDECMLPPPDSYPFLPNSAPIRLSAFPALILSLIFLLVL 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181258g00021 430 PANTHER PROTEIN COBRA 6 422 IPR006918 GO:0010215|GO:0016020
Stsc181258g00021 430 Pfam COBRA-like protein 43 206 IPR006918 GO:0010215|GO:0016020
Stsc181258g00021 430 PIRSF COBRA 1 430 IPR006918 GO:0010215|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181258g00021 Stsc-Chr181258 161848 163830 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181258g00021 18 430 COBRA Gene Family AT3G29810 68.029 0.0 620
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181258g00021 - - gmx:100798678 821.617