Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181258g00020 ATGAACCCCGGATGGACCATGGGATGGACATGGGCAAAGAAAGAAGTGATATGGTCAATGGTGGGAGCTCAAACAACAGAGCAAGGTGACTGCTCAAAGTTCAAAGGCAACATACCTCATTGTTGCAAGAAAATCCCAACAGTTGTGGACTTGCTCCCTGGTGTCCCTTACAACCAGCAATTCCAGAATTGTTGTAAGGGTGGAGTTGTCGCGGCGTGGGGCCAAGACCCTTCAATGGCTATCTCTTCATTCCAAATCAGTGTTGGCCAAGCTGGTACCTCCAACAAGACTGTTAAACTCCCCAAGAATTTCACTCTCTTGGCTCCCGGACCGGGCTACACTTGCGGCCCGGCCAAGGTTGTTCCTTCCACCACTTTCCTTACTCAGGACAAGCGGCGCAAGACTCAAGCCTTGATGACATGGAATGTTACCTGCACATACTCACAATTTCTAGCAAGAAAGAACCCTGCTTGTTGTGTTTCTTTGTCATCCTTCTACAATGAAACTATCACTCCTTGTCCCTCTTGTGCATGTGGCTGCCAGAACAAAAAGAATTGTGTCAAGAGTGACTCTAAAATTCTGAGCATGGTTGGTGTTCACACTCCAAAGAAAGACAATGAACCTTTGATGCAGTGCACTCACCATATGTGTCCAATAAGGGTACATTGGCATGTGAAGCAAAACTATAAGGACTATTGGAGAGTCAAGATTGCCATAACAAATTTCAATTACAGGATGAACTATTCCCTCTGGACTCTTGCAATTCAGCATCCAAATCTCAACAATGTCACACAAGTCTTCAGCTTTGATTACAAGCCTATACTTCCCTATGAGTCCATCAATGATACTGGCATGTTCTTTGGCATGAAATACTACAATGATCTATTAATGGAAGCTGGACCAACTGGGAATGTTCAATCAGAAGTGCTTCTTCAGAAGGACAAGGACACATTCACTTTCAAGCAAGGATGGGCATTTCCAAGAAAAGTATACTTTAATGGTGATGAATGCATGCTTCCACCACCAGATTCCTATCCATTCCTCCCTAATTCTGCACCTATTAGACTAAGTGCCTTCCCAGCACTCATTTTATCATTGATATTCTTGCTAGTTTTATGA 1119 0.4388 MNPGWTMGWTWAKKEVIWSMVGAQTTEQGDCSKFKGNIPHCCKKIPTVVDLLPGVPYNQQFQNCCKGGVVAAWGQDPSMAISSFQISVGQAGTSNKTVKLPKNFTLLAPGPGYTCGPAKVVPSTTFLTQDKRRKTQALMTWNVTCTYSQFLARKNPACCVSLSSFYNETITPCPSCACGCQNKKNCVKSDSKILSMVGVHTPKKDNEPLMQCTHHMCPIRVHWHVKQNYKDYWRVKIAITNFNYRMNYSLWTLAIQHPNLNNVTQVFSFDYKPILPYESINDTGMFFGMKYYNDLLMEAGPTGNVQSEVLLQKDKDTFTFKQGWAFPRKVYFNGDECMLPPPDSYPFLPNSAPIRLSAFPALILSLIFLLVL 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181258g00020 372 PANTHER PROTEIN COBRA 1 364 IPR006918 GO:0010215|GO:0016020
Stsc181258g00020 372 Pfam COBRA-like protein 2 148 IPR006918 GO:0010215|GO:0016020
Stsc181258g00020 372 PIRSF COBRA 1 372 IPR006918 GO:0010215|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181258g00020 Stsc-Chr181258 161848 163830 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181258g00020 3 372 COBRA Gene Family AT3G29810 67.828 0.0 553
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181258g00020 - - gmx:100798678 732.635