Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181258g00013 ATGGCTTTGATTGCAATTGTTGGTGGTGTTTTGTTCATGTTCTGTTTATGCTCTGCTCTCTTGAAGTGGAATAAAGTATGGTACGTTAACAAGAATAAAGGCTTGCCACATGGAACAATGGGGTGGCCACTTTTTGGAGAAACTACTGAGTTTCTTAAACAAGGTCCTAACTTCATGAAAAATAAAAGAGCAAGGTATGGCAGTTTTTTCAAAACACACATGTTTGGGAGCCCTACAATTGTATCAATGGATGGAGAGATGAATAGATACATTCTAATGAATGAATCAAAAGGGCTTGTTCCAGGATACCCTAAAGCCATGGTAGACATCTTGGGAGAATGCACCATTGCAGCTGTTCATGGCTCCACTCACAAGTACTTGAGAGGTGCCATGCTTTCCGTCATTAGTCCCACCATGATCAGAGATCAGCTTTTGCCTACACTTGATCGGTTCACGAGATCCTACCTTAGCAATTGGGACAATCAAGTCATCGACATCCAACAAAAAACCAAAGAGATGGCCCTTCTTGCATCTCTTCATCAGATCATAAACAAAGAATCAATCAGAATAAAAGATAGAATCACACCGGAATACTTCAAACTATTCTTAGGAACCCTTTCTTTGCCTATTCCTCTTCCGGGGACAAATTATAGTCGTGCATTTCAGTCAAGGAAAGTGATTGCGAGCATTATAAGTGAAGTAATAGAAGAAAGGAGAAAATCTCAAGAAACACACAAAGACATGCTTGCTGGATTGATGGGAAATGATGAATGTAGATACAATCTAAGTGATGAACAAATCATAGATCTAGTCATCACAGTTATGTTTTCTAGTTATGAAACTATTTCATCTACGGCAATGATGGCAATCAAGTATCTTCACGACCATCCCAACGCACTTCAACAATTCAGAGATGAGCATTTAGCCATTAGACAAAGGAAAAAACCAGATGAACCAATTGATTTCAACGATATCAAGTCAATGAAGTTTACTCGCGCGGTAATTTTTGAGACCCTTAGATTGGCCACAATAATTAGTGGGCTCTTTAGGAAAACTAGTGAAGACATGGAACTAAATGGTTATTTGATTCCCAAAGGGTGGAAGATATATGTGTACTTAAGAGAGATAAATTATGACCCTTCTCTATATCCTGAACCACTGAAGTTCAACCCATGGAGATGGCTGGAGAAGAACCTAGAATCAAATAACCAGTTCCTGATATTTGGAGGAGGTATCAAATTTTGTCCAGGGAAAGAGTTGGGGATAATAGAAATTTCAACTTTCTTGCACTATTTAGTAACAAGATACAGGTGGGAAGAAGTAGGAGGAGATACAGTACTGATATTTCCAACTGTTCAGGCACCTAATGGACTGCACATAAGGGTGTCATCCTACTAA 1398 0.3898 MALIAIVGGVLFMFCLCSALLKWNKVWYVNKNKGLPHGTMGWPLFGETTEFLKQGPNFMKNKRARYGSFFKTHMFGSPTIVSMDGEMNRYILMNESKGLVPGYPKAMVDILGECTIAAVHGSTHKYLRGAMLSVISPTMIRDQLLPTLDRFTRSYLSNWDNQVIDIQQKTKEMALLASLHQIINKESIRIKDRITPEYFKLFLGTLSLPIPLPGTNYSRAFQSRKVIASIISEVIEERRKSQETHKDMLAGLMGNDECRYNLSDEQIIDLVITVMFSSYETISSTAMMAIKYLHDHPNALQQFRDEHLAIRQRKKPDEPIDFNDIKSMKFTRAVIFETLRLATIISGLFRKTSEDMELNGYLIPKGWKIYVYLREINYDPSLYPEPLKFNPWRWLEKNLESNNQFLIFGGGIKFCPGKELGIIEISTFLHYLVTRYRWEEVGGDTVLIFPTVQAPNGLHIRVSSY 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181258g00013 465 Gene3D Cytochrome P450 28 464 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181258g00013 465 Pfam Cytochrome P450 36 445 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181258g00013 465 SUPERFAMILY Cytochrome P450 29 462 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181258g00013 465 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 408 417 IPR017972 GO:0005506|GO:0016705
Stsc181258g00013 465 FunFam Cytochrome P450 85A1 24 464 - -
Stsc181258g00013 465 PANTHER CYTOCHROME P450 26 33 443 - -
Stsc181258g00013 465 CDD CYP90-like 63 463 - -
Stsc181258g00013 465 PRINTS E-class P450 group I signature 63 82 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181258g00013 465 PRINTS E-class P450 group I signature 332 350 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181258g00013 465 PRINTS E-class P450 group I signature 372 396 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181258g00013 465 PRINTS E-class P450 group I signature 405 415 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181258g00013 465 PRINTS E-class P450 group I signature 415 438 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181258g00013 465 PRINTS E-class P450 group I signature 266 283 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181258g00013 Stsc-Chr181258 124251 128400 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181258g00013 83 465 Cytochrome P450 AT5G38970 60.677 0.0 510
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181258g00013 K09590 - gmx:100805958 693.345