Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181258g00010 ATGTTCTTGTTCTGTTTCTGCTCTGCTCTCTTGAAGTGGAATGAAGTAAGGTACATTAACAAGAATAAAGGCTTGCCACATGGAACAATGGGGTGGCCACTTTTTGGAGAAACTACTGAGTTTCTCAAACAAGGTCCTAACTTCATGAAAAACAAAAGAGCAAGGTATGGCAGTTTTTTCAAGACACACATATTAGGGAGCCCTACAATTGTATCACTGGATGCAGAGATGAATAGATACATTCTAATGAATGAATCAAAAGGGCTTGTTCCAGGATACCCCAAATCCATGTTAGACATCTTGGGAAAATGCAACATTGCAGCTGTTCATGGCTCCACTCACAAGTACTTGAGAGGTGCCTTGCTTTCCATCATTAGCCCCACCATCATCAGAGATCAGCTTTTGCCTAAAATTGATCAGTTCATGAGATCCCACTATAGCAATCTGGACAATCAAGTCATTGACATCCAAGACAAAACCAAACAGATGGCGTTCCTTTCGTCACTCCGGCAGATCGCAGGCGAAGAATCATTTAGAATAAAAGATCGGATCACACCGGAGTTTTCCAAACTAGTCTTAGGAACCATTTCTCTGCCCATTCCCCTCCCGGGGACGAATTATAGTCGCGCATTTCAGGCAAGGAAAGCAATTGTGAGCATTATAAGAGAAGTAATGGAAGAAAGGAGAAAATCCCAAGAAACACACAAAGACATGCTTGCTGGATTGATGGGAAATGATGAGAGTAGATACAAACTAAGTGATGAACAAATCATTGATCTAGTGATTACAGTTATCTATTCTGGTTATGAAACTGTTTCAGCTACTTCAATGATGGCAGTCAAGTATCTTCATGACCATCCCAAAGCACTTCAACAACTCAGAGAAGAGCAGTTGGCCATTAGACAAAGGAAGAAACCAGATGAACCACTTGATTATAACGATATCAAGTCAATGAAGTTTACTCGCGCGGTGATTTTTGAGACCTCTAGACTGGCCACAATAGTTAATGGGGTCCTAAGGAGAAACACTGAAGAAATGGAACTAAATGGTTATTTGATTCCCAAAGAATGGAAGTTATATGTGTACTTAAGAGAGATAAATTATGACCCTTCTCTATATCCTGAACCACTAAAGTTCAACCCATGGAGATGGATGGGGAACCTAGAATCAAATAGCCACTGCTTGGTATTTGGAGGAGGTACCAGATTGTGTCCAGGGAAAGAGTTGGGGATTGTAGAAATTTCAACTTTCTTGCACTATTTTGTTACAAGATACAGGTGGGAAGAAGTGGGAGGAACACTATTGAAATTTCCAAGAGTTCAAGCACCTAATGGACTGCACATAAGGTGTCATCTTATTAATTAG 1365 0.4051 MFLFCFCSALLKWNEVRYINKNKGLPHGTMGWPLFGETTEFLKQGPNFMKNKRARYGSFFKTHILGSPTIVSLDAEMNRYILMNESKGLVPGYPKSMLDILGKCNIAAVHGSTHKYLRGALLSIISPTIIRDQLLPKIDQFMRSHYSNLDNQVIDIQDKTKQMAFLSSLRQIAGEESFRIKDRITPEFSKLVLGTISLPIPLPGTNYSRAFQARKAIVSIIREVMEERRKSQETHKDMLAGLMGNDESRYKLSDEQIIDLVITVIYSGYETVSATSMMAVKYLHDHPKALQQLREEQLAIRQRKKPDEPLDYNDIKSMKFTRAVIFETSRLATIVNGVLRRNTEEMELNGYLIPKEWKLYVYLREINYDPSLYPEPLKFNPWRWMGNLESNSHCLVFGGGTRLCPGKELGIVEISTFLHYFVTRYRWEEVGGTLLKFPRVQAPNGLHIRCHLIN 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181258g00010 454 CDD CYP90-like 53 449 - -
Stsc181258g00010 454 SUPERFAMILY Cytochrome P450 19 437 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181258g00010 454 PANTHER CYTOCHROME P450 26 23 432 - -
Stsc181258g00010 454 PRINTS E-class P450 group I signature 53 72 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181258g00010 454 PRINTS E-class P450 group I signature 322 340 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181258g00010 454 PRINTS E-class P450 group I signature 362 386 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181258g00010 454 PRINTS E-class P450 group I signature 394 404 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181258g00010 454 PRINTS E-class P450 group I signature 404 427 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181258g00010 454 PRINTS E-class P450 group I signature 256 273 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181258g00010 454 PRINTS P450 superfamily signature 267 284 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181258g00010 454 PRINTS P450 superfamily signature 323 334 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181258g00010 454 PRINTS P450 superfamily signature 395 404 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181258g00010 454 PRINTS P450 superfamily signature 404 415 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181258g00010 454 Gene3D Cytochrome P450 17 453 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181258g00010 454 FunFam Cytochrome P450 85A1 14 452 - -
Stsc181258g00010 454 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 397 406 IPR017972 GO:0005506|GO:0016705
Stsc181258g00010 454 Pfam Cytochrome P450 26 430 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181258g00010 Stsc-Chr181258 104592 108850 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181258g00010 73 449 Cytochrome P450 AT5G38970 66.842 0.0 526
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181258g00010 K09590 - gmx:100805958 724.161