Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181257g00025 ATGGGGAAGTCATACCCGACGGTGAGTGAAGATTACCAAAAGGCCATTCACAAGGCCAGGAGGAAGCTCAGGGGTTTGATCTTCGAGAAGCAATGTGCTCCTCTTATGCTCCGTTTGGCATGGCACTCCGCTGGTACTTTCGACGTGAAGACAAAAACCGGTGGTCCGTTCGGAACGATGAAGCACGAAGCTGAACAAAAGCATGAGGCTAACAGAGGTCTTGATATTGCTGTCAACCTCTTGGAGCCTCTCAAGCAGCAGTTCCCTACCATAACTTACGCTGATTTTTACCAGTTGGCCGGGGTTGTTGCCGTTGAGATTACCGGTGGCCCTGATGTCCCTTTTCACCCTGGCAGAGAGGACAAGGCTGATCCACCTCCAGAGGGTCGCTTGCCCGATGCAACAAAGGGCAATGACCATTTGAGGGATTTGTTTGTGCAAACCATGGGACTCACTGATCAAGATATTATTGCCCTTTCTGGTGCTCACACCCTTGGTAGGTGCCACAAGGATCGTTCTGGATTTGAGGGTCCTTGGACCTCTAATCCTCTCATTTTTGACAACTCGTACTTCACGGAACTCTTGGGTGGCGAGAAGGAGGGGCTTTTGCAATTGCCAACTGACAAAGCATTGCTCGAGGATTCTGTTTTCCGGCCTCTTGTTGAGAAATATGCCCAAGATGAAGACGCATTCTTTGCTGATTACACTGAAGCTCACTTAAAGCTCTCGGAGCTTGGGTTTGCTGATACCTAA 753 0.4967 MGKSYPTVSEDYQKAIHKARRKLRGLIFEKQCAPLMLRLAWHSAGTFDVKTKTGGPFGTMKHEAEQKHEANRGLDIAVNLLEPLKQQFPTITYADFYQLAGVVAVEITGGPDVPFHPGREDKADPPPEGRLPDATKGNDHLRDLFVQTMGLTDQDIIALSGAHTLGRCHKDRSGFEGPWTSNPLIFDNSYFTELLGGEKEGLLQLPTDKALLEDSVFRPLVEKYAQDEDAFFADYTEAHLKLSELGFADT 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181257g00025 250 PANTHER THYLAKOID LUMENAL 29 KDA PROTEIN, CHLOROPLASTIC-RELATED 9 246 IPR044831 GO:0004601|GO:0034599
Stsc181257g00025 250 MobiDBLite consensus disorder prediction 115 137 - -
Stsc181257g00025 250 PRINTS Haem peroxidase superfamily signature 91 108 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc181257g00025 250 PRINTS Haem peroxidase superfamily signature 109 121 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc181257g00025 250 PRINTS Haem peroxidase superfamily signature 179 194 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc181257g00025 250 PRINTS Haem peroxidase superfamily signature 155 170 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc181257g00025 250 PRINTS Haem peroxidase superfamily signature 33 47 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc181257g00025 250 ProSitePatterns Peroxidases active site signature. 33 44 IPR019794 GO:0004601
Stsc181257g00025 250 Gene3D - 19 246 - -
Stsc181257g00025 250 CDD ascorbate_peroxidase 5 247 - -
Stsc181257g00025 250 Gene3D Peroxidase, domain 2 132 239 - -
Stsc181257g00025 250 ProSitePatterns Peroxidases proximal heme-ligand signature. 155 165 IPR019793 -
Stsc181257g00025 250 FunFam Cytosolic ascorbate peroxidase 19 136 - -
Stsc181257g00025 250 ProSiteProfiles Plant heme peroxidase family profile. 74 250 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc181257g00025 250 SUPERFAMILY Heme-dependent peroxidases 2 247 IPR010255 GO:0004601|GO:0006979|GO:0020037
Stsc181257g00025 250 MobiDBLite consensus disorder prediction 111 137 - -
Stsc181257g00025 250 PRINTS Plant ascorbate peroxidase signature 51 61 IPR002207 GO:0004601|GO:0006979|GO:0020037
Stsc181257g00025 250 PRINTS Plant ascorbate peroxidase signature 109 121 IPR002207 GO:0004601|GO:0006979|GO:0020037
Stsc181257g00025 250 PRINTS Plant ascorbate peroxidase signature 130 147 IPR002207 GO:0004601|GO:0006979|GO:0020037
Stsc181257g00025 250 PRINTS Plant ascorbate peroxidase signature 171 195 IPR002207 GO:0004601|GO:0006979|GO:0020037
Stsc181257g00025 250 PRINTS Plant ascorbate peroxidase signature 223 247 IPR002207 GO:0004601|GO:0006979|GO:0020037
Stsc181257g00025 250 PRINTS Plant ascorbate peroxidase signature 90 108 IPR002207 GO:0004601|GO:0006979|GO:0020037
Stsc181257g00025 250 PRINTS Plant ascorbate peroxidase signature 12 32 IPR002207 GO:0004601|GO:0006979|GO:0020037
Stsc181257g00025 250 PRINTS Plant ascorbate peroxidase signature 33 48 IPR002207 GO:0004601|GO:0006979|GO:0020037
Stsc181257g00025 250 PRINTS Plant ascorbate peroxidase signature 65 89 IPR002207 GO:0004601|GO:0006979|GO:0020037
Stsc181257g00025 250 PRINTS Plant ascorbate peroxidase signature 149 170 IPR002207 GO:0004601|GO:0006979|GO:0020037
Stsc181257g00025 250 Pfam Peroxidase 22 227 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc181257g00025 250 FunFam L-ascorbate peroxidase, cytosolic 132 239 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181257g00025 Stsc-Chr181257 165128 166431 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181257g00025 74 246 Peroxidase AT4G31760 32.407 2.34e-18 80.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181257g00025 K00434 - atri:130806020 440.269