Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181257g00007 ATGGGTTGCAGAAAACTCTGTTTGTTCTTCTGTGCTTTATCAATCTTTTGTTTCCATGTTTGTTTCTCTGCAAATTTTGTTCCAGTAGATAATTACCTTATTGATTGTGGATCAAGTTCTGTTACTGTAGTAGGTAACCGCAATTTCTCTGCGGATAGCTCTTCTAAGAAGTTACTTTCCACTCAGCAAGATGTTCTTGCAAGCACTTCCTTGAAATCAATCACTTCCAGTGGTGATTCCACTACTCTCTATCAAACTGCTAGGGTCTTCACTGGATCCTCAAAGTACACTTTCCCAATCAACCAAAAGGGAAGGCATTGGATCCGTCTTTATTTCTATCCATTTACATATCAGAATCACAATATGAGTTCAGCCAAATTCTCTGTGGCCACACAGAACAATGTCCTTGTTAGTGATTTTAGTGTGCAGAAAGATCCTGTCATGAAGGAATACTCTCTCAATGTGAGTTCCAACTCCCTTGTGATAGCCTTTACCCCTTCGAATGGCTCGATTGCATTCGTGAATGCAATCGAAGTTGTTTCGGTCCCTGTTGAGCTCATTGCTGATGTTGGTCTCAGCCTGAGTAATGGATTATCATCCTACTCCGGGCTGGCAGGACAAGCCTTGGAGACTGTCTGGAGGGTTAACATGGGTGGTCCAGACGTTTCCCCCGATAATGACACTCTTTCTAGAACCTGGGTTCCGGATCTTAACTTTCTAAAGGAAAAGAATCTTGCCTCTAATTTCTCAAAAGTTGGAGGTGTTCAGTATGCAAGCGGCTCGGCCACTCAGAATGATGCTCCGGTTGCTGTCTACGGTACTGGACAAGAGATGAACTCACAAAGTGATCCCCGGCTTAATTTCAATGTGACATGGGAGTTTCAGGTGGAGCCTGGATTTCAGTACCTTGTTAGACTTCACTTCTGTGATTTAGTGAGTCAAGGCCTCAATGAGCTTTATTTCAATGTTTATGTTGATTCCTTGTATGCTGCCAAGGATCTTGATCTTAGTACATTGAATCAAAATGCCTTGGGTGTTCCATATTATAGGGATGTGGTTACAGCCTTGACATCAAGCAACTCCCTCCGAGTAAGTATGGGTCCTTCTAGTATAAATAAGGACTACCCTAATGCCATTCTGAATGGTTTGGAGATCATGAAGATGAACAACTCAGTGGGCAGTCTTAGTGCAGGGACAGCTGCTGTGGCTAATAATTCCGGTTCGAATTCAAAGAATGTTGGTGTGATAGTTGGTGCAGTTCTTGGGGCAGTATGTGCAGTTGTCTTGGCTGGACTACTGTTTGTACTGTGCAGGAGGAGAAGGCGGATGGCGCGGCGGAGGCAGTCAAAGTCATGGATTCCTTTCTCCATCAATGGGACAGCTTCTCACACCATGGGAAGTAAATACTCTAATGGTACTACTATTAGTGCTGCTTCAAACTTCGAGTACCGTGTCCCTCTTGCTGCAGTTCAGGAGGCTACAAACAATTTTGATGAGAGTTGGGTTATTGGCATTGGTGGCTTTGGGAAAGTATACAAGGGGGAGTTGAGTGATGGCACTAAAGTGGCTGTTAAGAGAGGAAATCCTCGGTCACAGCAGGGTATTGCTGAGTTCCGAACCGAAATTGAAATGCTTTCTCAGTTCCGGCACAGGCATCTGGTTTCTTTGATTGGCTATTGTGATGAAAGGAATGAGATGATATTGATATATGAGTACATGGAGAAAGGAACACTCAAGGGTCACCTATATGGTTCAGGATTCCCAACCTTGAGTTGGAAGGAGAGGCTTGAGATATGCATTGGAGCAGCTAGAGGGCTTCATTATCTTCACACTGGATATGCTAAAGCAGTTATTCACCGAGATGTGAAGTCTGCTAACATTCTTCTTGATGAGAACCTCATGGCTAAAGTTGCTGATTTTGGATTGTCAAAGACAGGTCCAGAACTTGATCAGACTCATGTGAGCACTGCTGTAAAAGGAAGCTTTGGATACCTTGATCCTGAGTATTTCAGGAGGCAGCAGCTAACAGAAAAGTCTGATGTGTATTCATTCGGTGTGGTTCTGTTTGAAGTTCTTTGTGCAAGGCCTGTGATAGATCCTTCCCTTCCCAGGGAGATGGTAAACTTGGCAGAATGGGCAATGAAGTGGCAGAAGAAGGGGCAATTGGAGGAGATCATAGACCCGGCTCTCGCGAACAAAATCAGGCCGGAATCTCTGAGGAAGTTTGGAGAAACCGCGGAGAAATGCTTGGCGGATTTCGGTGTAGACAGGCCTTCTATGGGAGATGTGTTGTGGAATTTGGAGTATGCCTTGCAGCTTCAAGAGGCAGCTGCTGCTGAAGGCAGTGATCCTCAAGAAAACAGTACTAATATGATAGGTGAACTGTCTCCACAGGTCAACAACTTCAACAATGATGCAAGTGCCTCTGCCATCAACTTTGAAGGCACAAGTGTAGACGATCTGTCTGGTGTTTCCATGAGTAGGGTGTTCTCTCAGTTGGTGAAGTCAGAGGGAAGATGA 2520 0.4456 MGCRKLCLFFCALSIFCFHVCFSANFVPVDNYLIDCGSSSVTVVGNRNFSADSSSKKLLSTQQDVLASTSLKSITSSGDSTTLYQTARVFTGSSKYTFPINQKGRHWIRLYFYPFTYQNHNMSSAKFSVATQNNVLVSDFSVQKDPVMKEYSLNVSSNSLVIAFTPSNGSIAFVNAIEVVSVPVELIADVGLSLSNGLSSYSGLAGQALETVWRVNMGGPDVSPDNDTLSRTWVPDLNFLKEKNLASNFSKVGGVQYASGSATQNDAPVAVYGTGQEMNSQSDPRLNFNVTWEFQVEPGFQYLVRLHFCDLVSQGLNELYFNVYVDSLYAAKDLDLSTLNQNALGVPYYRDVVTALTSSNSLRVSMGPSSINKDYPNAILNGLEIMKMNNSVGSLSAGTAAVANNSGSNSKNVGVIVGAVLGAVCAVVLAGLLFVLCRRRRRMARRRQSKSWIPFSINGTASHTMGSKYSNGTTISAASNFEYRVPLAAVQEATNNFDESWVIGIGGFGKVYKGELSDGTKVAVKRGNPRSQQGIAEFRTEIEMLSQFRHRHLVSLIGYCDERNEMILIYEYMEKGTLKGHLYGSGFPTLSWKERLEICIGAARGLHYLHTGYAKAVIHRDVKSANILLDENLMAKVADFGLSKTGPELDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEVLCARPVIDPSLPREMVNLAEWAMKWQKKGQLEEIIDPALANKIRPESLRKFGETAEKCLADFGVDRPSMGDVLWNLEYALQLQEAAAAEGSDPQENSTNMIGELSPQVNNFNNDASASAINFEGTSVDDLSGVSMSRVFSQLVKSEGR 839
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181257g00007 839 FunFam Receptor-like protein kinase FERONIA 208 390 - -
Stsc181257g00007 839 SMART serkin_6 497 770 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc181257g00007 839 Gene3D Transferase(Phosphotransferase) domain 1 573 793 - -
Stsc181257g00007 839 Gene3D Phosphorylase Kinase; domain 1 458 572 - -
Stsc181257g00007 839 ProSitePatterns Serine/Threonine protein kinases active-site signature. 617 629 IPR008271 GO:0004672|GO:0006468
Stsc181257g00007 839 Gene3D - 31 183 - -
Stsc181257g00007 839 Gene3D - 207 390 - -
Stsc181257g00007 839 FunFam receptor-like protein kinase FERONIA 461 572 - -
Stsc181257g00007 839 PANTHER OS07G0166700 PROTEIN 484 774 IPR045272 GO:0004714|GO:0006468
Stsc181257g00007 839 MobiDBLite consensus disorder prediction 778 798 - -
Stsc181257g00007 839 PIRSF SRK 355 815 IPR024171 GO:0004674
Stsc181257g00007 839 PIRSF SRK 28 164 IPR024171 GO:0004674
Stsc181257g00007 839 ProSitePatterns Protein kinases ATP-binding region signature. 503 525 IPR017441 GO:0005524
Stsc181257g00007 839 FunFam Receptor-like protein kinase FERONIA 573 789 - -
Stsc181257g00007 839 SUPERFAMILY Protein kinase-like (PK-like) 474 768 IPR011009 -
Stsc181257g00007 839 MobiDBLite consensus disorder prediction 781 798 - -
Stsc181257g00007 839 ProSiteProfiles Protein kinase domain profile. 497 770 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc181257g00007 839 Pfam Protein tyrosine and serine/threonine kinase 502 696 IPR001245 GO:0004672|GO:0006468
Stsc181257g00007 839 FunFam Putative receptor-like protein kinase 31 183 - -
Stsc181257g00007 839 CDD STKc_IRAK 503 768 - -
Stsc181257g00007 839 Pfam Malectin-like domain 34 388 IPR024788 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181257g00007 Stsc-Chr181257 42123 44933 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181257g00007 1 839 Receptor kinase-like Gene Family AT3G46290 65.130 0.0 1099
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Stsc181257g00007 Malectin_like 9.2e-42 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181257g00007 - - gmx:100806488 1225.31