Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181257g00004 ATGGTTCTGATGAGGAACGGATTTCCCATCGCCAAACACCAGGTTTCTGACTCCGAATCATCACTGACAGCGACGACGCCCTCCTGTCCTCGGCAGTTCTTTTCCGATTCTATTATGGAATTAAGCGTGGAAAGCGCTCGCTCCATCATAGCCAAATGGGACCCACTTCTTCCCAGCGGCGGCGAAAACAAAGACTCATCGTTAACTCCTCTCTTCACTAACACGCGCCAAGAAGCCAAACAGTATCTTAACGCCGTTTCGAAGCTACAGTCCGCTATGCAACACCTCCTCACACTCAATTCCTCCTCCGACCGCCTCGTCGAGGCTTACTCCCTCATGCAAGTCGCCATGAAGAGGCTTGAGAGAGAGTTGTATCGTATATCAGCTGAGGTTAGGGACCATGTGGACACTCAGTACTCCCTCAACTACTCATCCTGCAGCAGCAGCTCCGCCTCCACAACTACTGATAGCCACAGCGACGACAATTCCTCCGACGATGAGAGTATTCGTGTTGCCAGGGTGGATTTGAAGGCCATCGTGGAGTGTATGTTCTCCGCTGGATACGGCAAAGAGTGCGTCCAGGTTTACACCAAGGTCAGAAAATCGATTGTGACTGAGGCACTGCAGAATCTCGGAGTTGAAAAGCCTAGGCTCTCTAAGATCAAGAAGATGCAGTGGGAGGTGTTTGATTTCAAGATCAAGACCTGGCTTAACGCAGTCAAAGTCTCCGTCGGATCTTTATTTCCCGGCGAGTGGAGTCTCTGTAACTATATATTTCCCTCTTCGGACAACACCACCGTAATTGAGTCCTGCTTTACCGAGATTTGCAAAGACGGTGCCGAAATGTTGTTTACGTTCCCTGAAATCATAGCAAAGTGCGAGAAAACGCCGGAGAAGATGTTTAGACTACTCGATCTCTACGAGGCTCTCTCTCAAAATTGGCCGAAAATCAAAAGCATATTCTCATACGAATCAACCTCCAGCGTAAGGTTACAAGTTGGAGTTTCTCATTTGAAAATCGGCGAGGCCGTTAGAGCGACGTTATCAACCTTCGAAACGGCGATCATGAAGGAGTCCTCAAAGACTCCGGTCCCAGGCGGCAGGATCCACCCGCTCACTCGCTACGTCATGAACTACATCTCATTCCTAGCCGATTACAGCGACGCGCTCACCAACATACTCATCGATTCACCAAAAACTCCGATGCCAGAGTCCTACTTCCGGTCACCGAAGCTTGCGGCGAAGACTCCGGCGCCGCCGGATCTGGCGGAGCGGCTGGCGTGGGAGATTCTTCTACTGCTCTGCAAGATCGACGGAAAAGCAGAGCTCTACAAGAACGTGGCGCAGGGTTACCTGTTTCTGGCGAACAACATGCAATACGTGGTCACAAAGGCGCGGAACTCGAAGCTAGGATCCATCCTCGGCGACGATTGGCTTGCGAGTCACGATCAGAAGGTGAAGGAATACGCGTCCAAGTACGTGAACATGGCGTGGAGCACGCTGGAGATGTCTCTGCCGGAGACTCCAAAGGAGGCGATGACACCGGCGGAAGCCTCCGCCAAGATCCAATTCTTCAATATGCGGTTCCAGGAAGCTTGCCGGGTGCAGTCTACGTGGATCGTACCCGACCTGAAACTGAGGGAGGATATCCAGAAATTGGTAGCTTCGAAGGTAGTGGCCAAGTACCGGGACTTCTACGTGAGGCATTGGGTCGGGTCGGAGTCGGTTATAGCGTTCTCGCCCGAGGATTTGCAGAATCATATTTCACTTATTTTGCATGATGTTGAAAATGCGGGGAGCATAGTCCTCCCGGCACTCCTCGTCCACTTCTCCGGCCAAGCTCTGCCCAAATTCCGGCGAGGGAACTTGGGAGCCAAGTAG 1881 0.5189 MVLMRNGFPIAKHQVSDSESSLTATTPSCPRQFFSDSIMELSVESARSIIAKWDPLLPSGGENKDSSLTPLFTNTRQEAKQYLNAVSKLQSAMQHLLTLNSSSDRLVEAYSLMQVAMKRLERELYRISAEVRDHVDTQYSLNYSSCSSSSASTTTDSHSDDNSSDDESIRVARVDLKAIVECMFSAGYGKECVQVYTKVRKSIVTEALQNLGVEKPRLSKIKKMQWEVFDFKIKTWLNAVKVSVGSLFPGEWSLCNYIFPSSDNTTVIESCFTEICKDGAEMLFTFPEIIAKCEKTPEKMFRLLDLYEALSQNWPKIKSIFSYESTSSVRLQVGVSHLKIGEAVRATLSTFETAIMKESSKTPVPGGRIHPLTRYVMNYISFLADYSDALTNILIDSPKTPMPESYFRSPKLAAKTPAPPDLAERLAWEILLLLCKIDGKAELYKNVAQGYLFLANNMQYVVTKARNSKLGSILGDDWLASHDQKVKEYASKYVNMAWSTLEMSLPETPKEAMTPAEASAKIQFFNMRFQEACRVQSTWIVPDLKLREDIQKLVASKVVAKYRDFYVRHWVGSESVIAFSPEDLQNHISLILHDVENAGSIVLPALLVHFSGQALPKFRRGNLGAK 626
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181257g00004 626 MobiDBLite consensus disorder prediction 144 158 - -
Stsc181257g00004 626 MobiDBLite consensus disorder prediction 144 166 - -
Stsc181257g00004 626 Gene3D Exocyst complex component Exo70 67 597 - -
Stsc181257g00004 626 PANTHER EXOCYST COMPLEX PROTEIN EXO70 34 585 IPR004140 GO:0000145|GO:0006887
Stsc181257g00004 626 Pfam Exo70 exocyst complex subunit 235 589 IPR046364 GO:0000145|GO:0005546|GO:0006887
Stsc181257g00004 626 SUPERFAMILY Cullin repeat-like 72 589 IPR016159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181257g00004 Stsc-Chr181257 22692 26083 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181257g00004 34 589 EXO70 exocyst subunit family AT5G59730 43.225 2.18e-151 449
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181257g00004 K07195 - adu:107461556 897.501