Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181256g00015 ATGGGTGTAGATTACTATAGTATATTGAAGGTAGAAAGAAATGCAACAGAAGATGATTTGAAGAAAGCATATAGGAAACTGGCAATGAAATGGCATCCTGACAAGAACCCTAACAATAAGAAAGAAGCTGAAGCCAATTTCAAGCAAATATCTGAGGCCTATGAGGTACTGAGTGATCCTCAAAAGAGGGTGATTTATGATCAGCAAGGAGAGGAAGGTTTGAAACATACACCACCACCTGGGAATGAACCAACTAATGGATTTAACCCAAGAAATGCTGAGGATATCTTTGCAGAGTTCTTTGGAGACAATCCTTTGGGATTTGGATCATCTGGACCTCATGGGAGGTCCAGGTTCCAATCCGAGGGAGGCGGATCATACAGCGGATACCATGCGCCGCTGAAGAAGCCGCCGGCTGTTGAGAGCAAGTTGCCATGCAGTTTGGAAGAGTTGTACACTGGTTCCACTAGAAAAATGAAGATCTCAAGGGTTGTCATGGATGCTAATGGGTAA 513 0.4366 MGVDYYSILKVERNATEDDLKKAYRKLAMKWHPDKNPNNKKEAEANFKQISEAYEVLSDPQKRVIYDQQGEEGLKHTPPPGNEPTNGFNPRNAEDIFAEFFGDNPLGFGSSGPHGRSRFQSEGGGSYSGYHAPLKKPPAVESKLPCSLEELYTGSTRKMKISRVVMDANG 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181256g00015 170 MobiDBLite consensus disorder prediction 68 92 - -
Stsc181256g00015 170 MobiDBLite consensus disorder prediction 106 140 - -
Stsc181256g00015 170 Pfam DnaJ domain 4 67 IPR001623 -
Stsc181256g00015 170 PRINTS DnaJ domain signature 42 62 IPR001623 -
Stsc181256g00015 170 PRINTS DnaJ domain signature 6 24 IPR001623 -
Stsc181256g00015 170 PRINTS DnaJ domain signature 62 81 IPR001623 -
Stsc181256g00015 170 PRINTS DnaJ domain signature 24 39 IPR001623 -
Stsc181256g00015 170 ProSitePatterns Nt-dnaJ domain signature. 47 66 IPR018253 -
Stsc181256g00015 170 ProSiteProfiles dnaJ domain profile. 4 70 IPR001623 -
Stsc181256g00015 170 CDD DnaJ 4 59 IPR001623 -
Stsc181256g00015 170 SMART dnaj_3 3 62 IPR001623 -
Stsc181256g00015 170 SUPERFAMILY Chaperone J-domain 3 111 IPR036869 -
Stsc181256g00015 170 Gene3D - 138 170 - -
Stsc181256g00015 170 Gene3D DnaJ domain 3 111 IPR036869 -
Stsc181256g00015 170 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 1 170 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181256g00015 Stsc-Chr181256 135846 137516 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181256g00015 5 67 C2H2 Transcription Factor Family AT1G74250 38.806 1.61e-10 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181256g00015 K09510 - qsa:O6P43_019394 254.218