Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181255g00033 ATGACACATTGGCGAGAACATGGGAATCTGATTCTGATGGATCTTACCAAAGCTATTATAGGTGTTGCGGGATTTGGTAATGTGTATGTGGGTTTGATTGATGAAGGGACTAAAGTTGCTGTTAAGAGAGGGAATCCAATCTCAGAACAAGGCAACAATGAGTTCCAAACTGAAACTCAAATGTTGTCTAAGCTAAGACACATGCATCTGACATTAGAGATTTGCATAGGAGCGGCCTGCAGCCTTCACTACCTCCACACAGGGACAGCACAAGGTATCATCCACCGTGATGTTAAGATCACCAACATTCTCCTTGATGAGAATTTCACTGCCAAGGTTTCTTATTTCAGCCTCTCCGAGGATGCACCTATGCGCCTGCCGCATGGGGTGCCATTAATCCTCAGTTGCCTAGAGAGCAAGTAA 423 0.4492 MTHWREHGNLILMDLTKAIIGVAGFGNVYVGLIDEGTKVAVKRGNPISEQGNNEFQTETQMLSKLRHMHLTLEICIGAACSLHYLHTGTAQGIIHRDVKITNILLDENFTAKVSYFSLSEDAPMRLPHGVPLILSCLESK 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181255g00033 140 ProSitePatterns Serine/Threonine protein kinases active-site signature. 93 105 IPR008271 GO:0004672|GO:0006468
Stsc181255g00033 140 SUPERFAMILY Protein kinase-like (PK-like) 18 123 IPR011009 -
Stsc181255g00033 140 Gene3D Phosphorylase Kinase; domain 1 15 72 - -
Stsc181255g00033 140 Pfam Protein tyrosine and serine/threonine kinase 71 122 IPR001245 GO:0004672|GO:0006468
Stsc181255g00033 140 ProSiteProfiles Protein kinase domain profile. 1 140 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc181255g00033 140 PANTHER OS07G0166700 PROTEIN 72 123 IPR045272 GO:0004714|GO:0006468
Stsc181255g00033 140 Gene3D Transferase(Phosphotransferase) domain 1 73 131 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181255g00033 Stsc-Chr181255 269916 270518 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181255g00033 19 121 Receptor kinase-like Gene Family AT4G39110 56.250 1.79e-42 147
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Stsc181255g00033 PK_Tyr_Ser-Thr 5.4e-07 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181255g00033 - - tpra:123893803 163.31