Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181254g00020 ATGGCAGCAGAACAAGAAGAGGGATTGAAGCTTTTGGGAGTGAGAGCAAGCCCATATAGTCACAGGGTGCTACTAGCTCTGAAGCTTAAGGGAGTCCAACATGAGTACCTTCAAGAGAACCTTGAACACAAGAGCCAGCAGCTTCTCAAGTACAACCCTATTCACAAGAAGGTACCTGTGTTGGTTCACAAGGAGAAACCCATAATAGAGTCACTTGTGATTGTTGAATATATTGATGAGACTTGGATGGTTACAATATCTTGCCTCAGGAGCCTTACCAAAGAGCCTTGGCTAGGTTCTGGGCCAAGTTTATTGCTGAAAAGTGCATGA 330 0.4455 MAAEQEEGLKLLGVRASPYSHRVLLALKLKGVQHEYLQENLEHKSQQLLKYNPIHKKVPVLVHKEKPIIESLVIVEYIDETWMVTISCLRSLTKEPWLGSGPSLLLKSA 109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181254g00020 109 FunFam Glutathione S-transferase GSTU6 4 89 - -
Stsc181254g00020 109 Pfam Glutathione S-transferase, N-terminal domain 8 80 IPR004045 -
Stsc181254g00020 109 Gene3D Glutaredoxin 1 88 - -
Stsc181254g00020 109 PANTHER GST N-TERMINAL DOMAIN-CONTAINING PROTEIN 7 83 - -
Stsc181254g00020 109 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 7 86 IPR004045 -
Stsc181254g00020 109 SUPERFAMILY Thioredoxin-like 8 82 IPR036249 -
Stsc181254g00020 109 CDD GST_N_Tau 9 82 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181254g00020 Stsc-Chr181254 157117 158251 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181254g00020 3 82 Glutathione S-transferase Gene Family AT2G29490 62.500 5.70e-29 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181254g00020 K00799 - qsa:O6P43_016697 118.242