Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181254g00017 ATGGCTGGAGATGGAGAAGTTCAGTTCTTAGGTGCTGGTGGAAGCCCATTTGCAAGAAGGGTGCAAATAGCATTGAAACTGAAGGGAGTAGAATACACTTACATTGAACAAGATCTTAGAAACAAGAGTGAACTACTTCTCAAATACAACCCTATTTACAAGAAGGTCCCTGTTCTTGTACACAATGGAAAACCCTTGGCAGAGTCCCTTGTCATTCTTGAATACATTGATGAGACTTGGAACAATAACTATCCTATTTTGCCTCAAAATCCTTATGATAAGGCCATGGCTAGATTTTGGACAAAGTTCATTGATGACAAGTGCATCCCTGCAATAGGGAAGGCTGCATGGACTACAAAAAAAGAAGAACGTGAGAAGGGAATTGAAGAAGCAACTGAAGCCCTTCAAATTCTTGAGAATGAGCTAAAGCATTATCATCACAAGTTCTTTGGTGGAGACACAATTGGTATTGTTGACATTGCTGCTAGCTTCATAGCTTATTGGCTTCCTATTATTGAACAAGCTACGGGCTTCACTTTGTTGACCGTTCACAAATTCCCTAATCTACATAAGTGGACTCAAGAATTCACTAACCACTCTGTTGTGAAGGAAAACTTACCTCCAAGTGATAAGCTTTTGGGCTTTTTCAAAGCCCGCTATGCTTCCTTGAAGTAG 675 0.403 MAGDGEVQFLGAGGSPFARRVQIALKLKGVEYTYIEQDLRNKSELLLKYNPIYKKVPVLVHNGKPLAESLVILEYIDETWNNNYPILPQNPYDKAMARFWTKFIDDKCIPAIGKAAWTTKKEEREKGIEEATEALQILENELKHYHHKFFGGDTIGIVDIAASFIAYWLPIIEQATGFTLLTVHKFPNLHKWTQEFTNHSVVKENLPPSDKLLGFFKARYASLK 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181254g00017 224 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 5 84 IPR004045 -
Stsc181254g00017 224 FunFam Tau class glutathione S-transferase 1 89 - -
Stsc181254g00017 224 SFLD Main (cytGST) 4 222 - -
Stsc181254g00017 224 CDD GST_C_Tau 91 219 IPR045074 GO:0004364|GO:0006749
Stsc181254g00017 224 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 90 220 IPR010987 -
Stsc181254g00017 224 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 11 212 IPR045073 -
Stsc181254g00017 224 SUPERFAMILY Thioredoxin-like 12 108 IPR036249 -
Stsc181254g00017 224 Gene3D - 90 224 - -
Stsc181254g00017 224 Pfam Glutathione S-transferase, C-terminal domain 104 198 IPR004046 -
Stsc181254g00017 224 Gene3D Glutaredoxin 2 89 - -
Stsc181254g00017 224 Pfam Glutathione S-transferase, N-terminal domain 9 78 IPR004045 -
Stsc181254g00017 224 SFLD Main.3: Omega- and Tau-like 4 222 IPR045073 -
Stsc181254g00017 224 CDD GST_N_Tau 7 80 - -
Stsc181254g00017 224 FunFam Tau class glutathione S-transferase 87 224 - -
Stsc181254g00017 224 SUPERFAMILY GST C-terminal domain-like 78 220 IPR036282 -
Stsc181254g00017 224 Coils Coil 121 148 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181254g00017 Stsc-Chr181254 142120 143579 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181254g00017 1 223 Glutathione S-transferase Gene Family AT3G09270 52.232 3.80e-84 248
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181254g00017 K00799 - gmx:100819805 341.273