Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181254g00015 ATGGATTCTTCGGATAATGAACAAGTGAGGTTATTGGGAAAATGGGCGAGCCCATTCAGCAACAGAGTAGACCTTGCTTTGAAGCTAAAGGGTGTTCCATACAAGTACTCAGAGGAAGATCTTGCTAACAAGAGTGTTGACTTACTCAACTATAACCCTGTTCACAAGAAGGTACCTGTTCTTGTTCACAATGGAAACTCCATAGCTGAATCACTTGTTATTCTTCAATACATAGATGAGGTTTGGAACAACCACCCCTTTTTGCCACAAGAACCTTATCAAAGAGCCTTGGCACGTTTCTGGTGTAAAACCCTTGACGACAAGATCTTGCCTACAATATGGAGTGCTTGTTGGAGCGACGAGAAAGGGTGCGAGAAGGCGGTTGAGGAAGCCTTGGAAGCTCTCAAGATACTGCAAGATGAGCTGAAAGACAAGAAGTTCTTTGGAGGAGAGACCATAGGATTGGTGGACATAGCAGCAAATTTCATTGGTTATTGGGTTTCTATATTACAAGAAATTGCAGGGTTAGAGTTATTGACCATTGAGAAATTCCCCAAATTATATAAATGGAGTGAAGAGTATATCAATCACCCTGTGATCAAAGAAGGCCTGCCTCCAAGAGATAAATTGTTTGCATTTTTCAAAGCATCTGCTAAAAAGTAG 663 0.4133 MDSSDNEQVRLLGKWASPFSNRVDLALKLKGVPYKYSEEDLANKSVDLLNYNPVHKKVPVLVHNGNSIAESLVILQYIDEVWNNHPFLPQEPYQRALARFWCKTLDDKILPTIWSACWSDEKGCEKAVEEALEALKILQDELKDKKFFGGETIGLVDIAANFIGYWVSILQEIAGLELLTIEKFPKLYKWSEEYINHPVIKEGLPPRDKLFAFFKASAKK 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181254g00015 220 CDD GST_C_Tau 92 216 IPR045074 GO:0004364|GO:0006749
Stsc181254g00015 220 Pfam Glutathione S-transferase, N-terminal domain 8 80 IPR004045 -
Stsc181254g00015 220 FunFam Glutathione S-transferase U10 3 87 - -
Stsc181254g00015 220 SUPERFAMILY GST C-terminal domain-like 80 218 IPR036282 -
Stsc181254g00015 220 Gene3D Glutaredoxin 3 87 - -
Stsc181254g00015 220 CDD GST_N_Tau 9 82 - -
Stsc181254g00015 220 Pfam Glutathione S-transferase, C-terminal domain 119 198 IPR004046 -
Stsc181254g00015 220 Coils Coil 121 145 - -
Stsc181254g00015 220 SFLD Glutathione Transferase (cytosolic) 6 219 IPR040079 -
Stsc181254g00015 220 SFLD Main.3: Omega- and Tau-like 6 219 IPR045073 -
Stsc181254g00015 220 Gene3D - 88 220 - -
Stsc181254g00015 220 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 12 210 IPR045073 -
Stsc181254g00015 220 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 91 220 IPR010987 -
Stsc181254g00015 220 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 7 86 IPR004045 -
Stsc181254g00015 220 FunFam Tau class glutathione S-transferase 88 220 - -
Stsc181254g00015 220 SUPERFAMILY Thioredoxin-like 8 109 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181254g00015 Stsc-Chr181254 136514 137770 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181254g00015 4 216 Glutathione S-transferase Gene Family AT3G09270 58.140 6.63e-91 265
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181254g00015 K00799 - gmx:547582 368.237