Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181254g00014 ATGGATTCTTCGGATAATGAACAAGTGAGGTTATTGGGAAAATGGGCGAGCCCATTCAGCAACAGAGTAGACCTTGCTTTGAAGCTAAAGGGTGTTCCATACAAGTACTCAGAGGAAGATCTTGCTAACAAGAGTGTTGACTTACTCAACTATAACCCTGTTCACAAGAAGGTACCTGTTCTTGTTCACAATGGAAACTCCATAGCTGAGTCACTTGTTATTCTTCAATACATAGATGAGGCTTGGAACAACCACCCCTTTTTGCCACAAGAACCTTATCAAAGAGCCTTGGCACGTTTCTGGTGTAAAACCCTTGATGACAAGATCTTGCCTGCAATATGGAATGCTTGTTGGAGTAATGAGAAAGGGCGCGAGAAAGCGGTTGAGGAAGCCTTGGAAGCTCTCAAGATACTGCAAGATGAGCTAAAAGACAAGAAGTTCTTTGGAGGAGAGACCATAGGATTGGTGGACATAGCAGCAAATTTCATTGGTTATTGGGTTTCTATATTACAAGAAATTGCAGGGTTGGAGTTACTGACCATTGAGAAATTTCCCAAATTATATAAATGGAGTCAAGAGTATATCAATCACCCTGTGATCAAGGAAGGCCTTCCTCCAAGAGATGAATTGTTTGCATTTTTCAAAGCATCTGCTAAAAAGTAG 663 0.4118 MDSSDNEQVRLLGKWASPFSNRVDLALKLKGVPYKYSEEDLANKSVDLLNYNPVHKKVPVLVHNGNSIAESLVILQYIDEAWNNHPFLPQEPYQRALARFWCKTLDDKILPAIWNACWSNEKGREKAVEEALEALKILQDELKDKKFFGGETIGLVDIAANFIGYWVSILQEIAGLELLTIEKFPKLYKWSQEYINHPVIKEGLPPRDELFAFFKASAKK 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181254g00014 220 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 7 86 IPR004045 -
Stsc181254g00014 220 CDD GST_C_Tau 92 216 IPR045074 GO:0004364|GO:0006749
Stsc181254g00014 220 Coils Coil 125 145 - -
Stsc181254g00014 220 SUPERFAMILY Thioredoxin-like 8 109 IPR036249 -
Stsc181254g00014 220 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 12 210 IPR045073 -
Stsc181254g00014 220 Pfam Glutathione S-transferase, C-terminal domain 110 198 IPR004046 -
Stsc181254g00014 220 FunFam Glutathione S-transferase U10 3 87 - -
Stsc181254g00014 220 CDD GST_N_Tau 9 82 - -
Stsc181254g00014 220 Gene3D Glutaredoxin 3 90 - -
Stsc181254g00014 220 SFLD Main (cytGST) 6 219 - -
Stsc181254g00014 220 FunFam Tau class glutathione S-transferase 88 220 - -
Stsc181254g00014 220 SFLD Main.3: Omega- and Tau-like 6 219 IPR045073 -
Stsc181254g00014 220 Pfam Glutathione S-transferase, N-terminal domain 8 80 IPR004045 -
Stsc181254g00014 220 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 91 220 IPR010987 -
Stsc181254g00014 220 SUPERFAMILY GST C-terminal domain-like 80 218 IPR036282 -
Stsc181254g00014 220 Gene3D - 91 220 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181254g00014 Stsc-Chr181254 132145 137770 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181254g00014 4 216 Glutathione S-transferase Gene Family AT3G09270 58.140 5.85e-92 267
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181254g00014 K00799 - gmx:547582 391.349