Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181253g00035 ATGGAAGAAGAAGCAAGAAGCTGGCTAATACCTACCTCAATATTTATCCTCTTCTTCTTTCTTAAGTACATACTTCATCAGATCCATGGCAAGCACAAAAACCTACCACCGAGTCCACCATCTCTACCAATAATAGGTCACCTTCATCTCATCAAACAACCCTTACAACAAAGCTTTCACAGCCTCGCACAGAAATATGGGCACATGGTGTTCCTCAAACTTGGAACACGGAAGGCACTTGTTGTGTCTTCACCTGCAGCTGTTGAAGAATGTCTCACAAAGACTAATGATATCATTTTTGCAAATCGTCCCAGAACACTTGCCTCCAAGAATCTCAACTACGATAGTAAGACAGTCGGGTTTGCTTCGTACGGGGACCACTGGCGCAACCTCCGCCGTCTAACCACCGTGGAGCTCTTCTCTACCAATCGCCTTGCCATGTTAGAGAGTGTTCGTGAGGAAGAGGTTCAGTTTTTGGTGAAGCAACTCTTTCAAGAGTGCTGCAACGGTGGTCAAACTCAAAAGTCAAAGGTAGAAGTGAGGCCAAAATTTGTGGGGGTTGCTTTTAACATGATGCTGAGGATGATATCCGGGAAAAGGTACTACGGTAATGATATTGATGAAGATGGAAAAGAGTTCCAAACTCTTATGAGGGAGTTCACGGCCCTTCAAGGTGCGAGCATTAACGACTTCATTCCAATACTCAAATGGATTGATTTTCAAGGCGTGGAAAAGAAGATGGTGGAGGTGATGAAAAGGGCGGATAGCTTTTTTCAGAAACTAATTGATGAGCACCGAAGGAATTATGAAAGCGTGAGTAATGAAAGTAAAATGGACAAGAATATGAAGCTGAATTTGATTGATGTCATGTTGGAATTGCAACAGAAGGAACCCGAATTCTATACGGATGAAACTATCAAAGGAGTCATTCTGGCAATGCTGATAGCAGGGTCAGAAACCTCTGCTATTACCATGGAATGGACAGTGTCACTTCTTCTCAACAATCCACAAAAGATGAAGAAGCTTCAACATGAGATACAAACATATGCAGGCCATGATCAACTCTTAAATGAATCAAACGCTGCCAAAATCAAGTACCTTCAGAATGTAATCACCGAGACACTTCGAATATACCCTGTGGCACCACTTCTCATACCTCACGAGTCTTCAACTGATTGCAAAGTTTGTGGCTATGACATACCAAAAGGTACAATGCTGTTCGTGAACTTGTTGACACTGCAAAGGGACCCTAACTTATGGGCAGATCCTATGGAATTCGTTCCAGAAAGATTTGAGGGAGATGGTGGTGGTGAAGTTTGCTATAATATGATTCCATTTGGTGCTGGAAGAAGAGCATGCCCTGGAGCTGGTTTGGCAAAACGTATTACGGCACATGCATTGGGAGCATCGATTCAATGTTTTGAATGGCAGAAAGTTGAGGATGGAGAAGTGGACATGACAGAGGAAATAGGGTTATCGTTGCCCAAAGCTGAACCTTTGTTTGCTTATTGCAAACCACGTGAAGAAATGATGAACATTCTATCCAATATATGA 1554 0.4273 MEEEARSWLIPTSIFILFFFLKYILHQIHGKHKNLPPSPPSLPIIGHLHLIKQPLQQSFHSLAQKYGHMVFLKLGTRKALVVSSPAAVEECLTKTNDIIFANRPRTLASKNLNYDSKTVGFASYGDHWRNLRRLTTVELFSTNRLAMLESVREEEVQFLVKQLFQECCNGGQTQKSKVEVRPKFVGVAFNMMLRMISGKRYYGNDIDEDGKEFQTLMREFTALQGASINDFIPILKWIDFQGVEKKMVEVMKRADSFFQKLIDEHRRNYESVSNESKMDKNMKLNLIDVMLELQQKEPEFYTDETIKGVILAMLIAGSETSAITMEWTVSLLLNNPQKMKKLQHEIQTYAGHDQLLNESNAAKIKYLQNVITETLRIYPVAPLLIPHESSTDCKVCGYDIPKGTMLFVNLLTLQRDPNLWADPMEFVPERFEGDGGGEVCYNMIPFGAGRRACPGAGLAKRITAHALGASIQCFEWQKVEDGEVDMTEEIGLSLPKAEPLFAYCKPREEMMNILSNI 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181253g00035 517 PRINTS E-class P450 group I signature 305 322 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181253g00035 517 PRINTS E-class P450 group I signature 187 205 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181253g00035 517 PRINTS E-class P450 group I signature 443 453 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181253g00035 517 PRINTS E-class P450 group I signature 325 351 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181253g00035 517 PRINTS E-class P450 group I signature 63 82 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181253g00035 517 PRINTS E-class P450 group I signature 409 433 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181253g00035 517 PRINTS E-class P450 group I signature 453 476 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181253g00035 517 PRINTS E-class P450 group I signature 368 386 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181253g00035 517 CDD CYP81 67 500 - -
Stsc181253g00035 517 PANTHER CYTOCHROME P450 82C3-RELATED 14 508 - -
Stsc181253g00035 517 SUPERFAMILY Cytochrome P450 36 507 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181253g00035 517 Pfam Cytochrome P450 36 496 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181253g00035 517 FunFam Cytochrome P450 CYP81N5 27 506 - -
Stsc181253g00035 517 Gene3D Cytochrome P450 28 515 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181253g00035 517 PRINTS P450 superfamily signature 444 453 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181253g00035 517 PRINTS P450 superfamily signature 316 333 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181253g00035 517 PRINTS P450 superfamily signature 369 380 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181253g00035 517 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 446 455 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181253g00035 Stsc-Chr181253 235354 238603 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181253g00035 15 507 Cytochrome P450 AT4G37330 45.674 2.22e-150 437
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181253g00035 - - gmx:100794610 653.669