Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181253g00033 ATGGTGTTCCTCAAACTTGGAACACGGAAGGCACTTGTTGTGTCTTCACCTGCAGCTGTTGAAGAATGTCTCACAAAGACTAATGATATCATTTTTGCAAACCGTCCCAAAACACTTTCCTCCAAGAATCTCTACTACGATAGCAAGACAATCGGGTCTTCTTCCTACGGTGACCATTGGCGAAGCCTCCGCCGTCTAACCACCTTGGAGCTCCTCTCTACCAATCGCCTTGCCATGTTTGAGAGGGTTCGTGAGGAAGAGATTCAGTTGTTGGTGAAGCAACTCTTTGAAGAATGCAGAAACGATGGTCAAACTCAAAAGTCAAAGGTAGAACTGAGGCCAAAATTTGTTGGAGTTACTTTCAACATGATGCTGAGGATGATATCCGGGAAAAGGTACTACGGTAATGATATTGATGAAGATGGTAAAGAGTTCCAAACTCTTATGAGGGAGTTCACGGCCCTTCAAGGTGTGAATATGAATGACTTCATTCCAATACTGAAATTGATTGATTTTCAAGGCATAGAAAAGAAGATGGCGAAGCTGATGAAAAGGGCGGATAGCTTTTTTCAGAAACTAATTGATGAGCACCGAAGGAATTATGAAAGCGTGAGTAATGAAAGTAAAATGGACAAGAATATGAAGCTGAATTTGATTGATGTCATGTTGGAATTGCAACAGAAGGAACCCGAATTCTACACGGATGAAACCGTCAAAGGAGTCATTCTGGCAATGCTGATAGCAGGATCAGAAACTTCGGCTACTACTATGGAATGGGCAGTGTCGCTTCTCCTCAACAATCCACAAAAGATGAAGAAGCTTCAACATGAGATACAAACACATGCAGGACATGATCAACTCTTGAATGAATCAAATGCTGCCAAAATCAAGTACCTTCAGAATGTAATCACTGAGACACTACGAATATACCCTGTGGTACCACTTCTCGTACCTCACGAGTCTTCAACTGATTGCAAAGTTTGTGGCTATGATATACCAAAAGGAACAATGCTGTTTGTGAACTTGTGGACACTACAAAGGGACCCTAACTTATGGGCAGATCCTATGAAATTCATTCCAGAAAGATTTGAAGGAGATGTTGGTGGTGGTGGTGGTAGTGAAGTTGGTTACAATATGATTTCATTTGGTGTTGGAAGAAGAGCATGCCCTGGAGCTGGTTTGGCAAAACGTGTTATGGGGCATGCATTGGGAGCGTTGATTCAATGTTTTGAATGGCAGAAAGTTGAGGATGGAGAAGTGGACATGACAGAGGGAACAGGGCTAGTGTTGCCCAAAGCTCAGCCTTTGGTTGCTTTTTGTAAGCCACGTCAAGAATTCATCAACATTCTATCAAAGGAAAGTTATAGTCATTGA 1374 0.4221 MVFLKLGTRKALVVSSPAAVEECLTKTNDIIFANRPKTLSSKNLYYDSKTIGSSSYGDHWRSLRRLTTLELLSTNRLAMFERVREEEIQLLVKQLFEECRNDGQTQKSKVELRPKFVGVTFNMMLRMISGKRYYGNDIDEDGKEFQTLMREFTALQGVNMNDFIPILKLIDFQGIEKKMAKLMKRADSFFQKLIDEHRRNYESVSNESKMDKNMKLNLIDVMLELQQKEPEFYTDETVKGVILAMLIAGSETSATTMEWAVSLLLNNPQKMKKLQHEIQTHAGHDQLLNESNAAKIKYLQNVITETLRIYPVVPLLVPHESSTDCKVCGYDIPKGTMLFVNLWTLQRDPNLWADPMKFIPERFEGDVGGGGGSEVGYNMISFGVGRRACPGAGLAKRVMGHALGALIQCFEWQKVEDGEVDMTEGTGLVLPKAQPLVAFCKPRQEFINILSKESYSH 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181253g00033 457 Gene3D Cytochrome P450 1 453 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181253g00033 457 FunFam Cytochrome P450 82C4 1 441 - -
Stsc181253g00033 457 SUPERFAMILY Cytochrome P450 2 443 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181253g00033 457 CDD CYP81 3 436 - -
Stsc181253g00033 457 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 382 391 IPR017972 GO:0005506|GO:0016705
Stsc181253g00033 457 PRINTS P450 superfamily signature 380 389 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181253g00033 457 PRINTS P450 superfamily signature 248 265 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181253g00033 457 PRINTS P450 superfamily signature 301 312 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181253g00033 457 PRINTS P450 superfamily signature 389 400 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181253g00033 457 Pfam Cytochrome P450 2 434 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181253g00033 457 PRINTS E-class P450 group I signature 341 365 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181253g00033 457 PRINTS E-class P450 group I signature 389 412 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181253g00033 457 PRINTS E-class P450 group I signature 257 283 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181253g00033 457 PRINTS E-class P450 group I signature 237 254 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181253g00033 457 PRINTS E-class P450 group I signature 300 318 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181253g00033 457 PRINTS E-class P450 group I signature 379 389 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181253g00033 457 PRINTS E-class P450 group I signature 119 137 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181253g00033 457 PANTHER CYTOCHROME P450 82C3-RELATED 2 444 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181253g00033 Stsc-Chr181253 221345 231782 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181253g00033 3 441 Cytochrome P450 AT5G67310 44.773 2.99e-141 412
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181253g00033 - - gmx:100794610 565.844