Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181253g00032 ATGGAAGAGGAAGCAGCTTCTGGTACCTGGCTGATAATAAGCCTTCTTCTCTCGTTTCTTTTTCTTGCTAAATTCATACTTGAAAGAAACAAAAGCAACAAAAACCTACCACCAAGTCCACCATCCCTACCAATCATAGGCCACCTTCACCTCATAAAACAACCCTTACACCGAAGCCTTCACAGCCTCACACAGAAATATGGGCACATGGTGTTCCTCAAACTTGGAACACGGAAGGCACTTGTTGTGTCTTCACCTGCAGCTGTTGAAGAATGTCTCACAAAGAATAATGATATCATTTTTGCAAACCGTCCCAAAACACTTGCTGGGAAGCATCTCAACTACAATAACAAGACTATGGCGTTTGCTCCCTACGGCGACCATTGGCGCAGCCTCCGCCGGCTAACTTCTCTTGAGCTCTTCTCCGCCAACCGTCTTGCCATGCTTGCTAGAGTCCGAGAGGAAGAGGTTCACCTTTTGGTCAAACAACTCTTTCAAGATTGCAAAGGTCAACAAAACTTGAAGGTAGAACTTAGGCCGAGATTTATGGAGCTTTCTTTCAATATGATGCTGAGGATGATATCTGGGAAGCGTTATTATGGAAAGGATATTGAGGAAGAAGGAAAAGAGTTCCAGATTCTAGTGAAGGAGATGGCGGAGCTTCTTGGTAGTGGGAACTTGAATGACTTCATTCCACTCCTAAAATGGGTTGATTTCCAAAGTCTGGAAAAGAGGATGGTGAGGTTGATGAAAAAGATGGATAGCTTTTTACAGAAGCTACTTGATGATCATCGAAGAAATAGGAGCATCAAAGGAAACCAACAAAATAATATGAATCTCAATTTAATTGATGTCATGTTGGATCTTCAACACAAGGATCCTGAATTCTACACGAATGAAACTGTCAAAGGAGTCATTGTGGCAATGCTGACAGCTGGGTCCGAAACTTCAGCTGGTACTCTGGAATGGGCAGTCTCACTTCTGCTCAACAACCCTAAAACAATGAAGAAACTTGAAGATGAATTGCACACTTATGCAGGCCATGATCAACTCTTGAATGAATCAGAAGCAACCAAACTCAAGTACCTTCAAAGCGTTATAACCGAGACTCTTCGTCTTTACCCTGCAGCTCCGCTTCTTCTACCTCACGAGTCTTCAAACGATTGCAAAGTTTGTGGCTATGACATACCAAAAGGGACAATGCTGTTTGTCAATTTGTGGACACTGCAAAGAGACCCTAATTTGTGGGAGGATCCTACAATGTTTGTGCCGGAGAGATTTGAGGGAGATGGTGGCGGTGGTGATGATCACGGCGGCGTAATTTATAATATGATTCCATTTGGTGTTGGAAGAAGAGCTTGCCCCGGAGGTGTTTTGGCAAAACGTGTTATGGGACATGCATTGGGAGCATTGGTTCAGTGTTTTGAGTTGGACAAAATTGGAAATGAAGAAATTAACATGAATGAAGGAGTAGGTCTTACCATACCCAAGGTTGAACCTTTGGTTGCTTTATGCAGACCACGCCAACAAATGCTCAAGGTTCTCTCCAATATATAA 1557 0.431 MEEEAASGTWLIISLLLSFLFLAKFILERNKSNKNLPPSPPSLPIIGHLHLIKQPLHRSLHSLTQKYGHMVFLKLGTRKALVVSSPAAVEECLTKNNDIIFANRPKTLAGKHLNYNNKTMAFAPYGDHWRSLRRLTSLELFSANRLAMLARVREEEVHLLVKQLFQDCKGQQNLKVELRPRFMELSFNMMLRMISGKRYYGKDIEEEGKEFQILVKEMAELLGSGNLNDFIPLLKWVDFQSLEKRMVRLMKKMDSFLQKLLDDHRRNRSIKGNQQNNMNLNLIDVMLDLQHKDPEFYTNETVKGVIVAMLTAGSETSAGTLEWAVSLLLNNPKTMKKLEDELHTYAGHDQLLNESEATKLKYLQSVITETLRLYPAAPLLLPHESSNDCKVCGYDIPKGTMLFVNLWTLQRDPNLWEDPTMFVPERFEGDGGGGDDHGGVIYNMIPFGVGRRACPGGVLAKRVMGHALGALVQCFELDKIGNEEINMNEGVGLTIPKVEPLVALCRPRQQMLKVLSNI 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181253g00032 518 FunFam Cytochrome P450 family protein 27 511 - -
Stsc181253g00032 518 Pfam Cytochrome P450 37 497 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181253g00032 518 Gene3D Cytochrome P450 22 504 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181253g00032 518 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 447 456 IPR017972 GO:0005506|GO:0016705
Stsc181253g00032 518 SUPERFAMILY Cytochrome P450 37 508 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181253g00032 518 PANTHER CYTOCHROME P450 82C3-RELATED 16 509 - -
Stsc181253g00032 518 PRINTS E-class P450 group I signature 301 318 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181253g00032 518 PRINTS E-class P450 group I signature 454 477 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181253g00032 518 PRINTS E-class P450 group I signature 405 429 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181253g00032 518 PRINTS E-class P450 group I signature 444 454 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181253g00032 518 PRINTS E-class P450 group I signature 185 203 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181253g00032 518 PRINTS E-class P450 group I signature 321 347 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181253g00032 518 PRINTS E-class P450 group I signature 364 382 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181253g00032 518 PRINTS E-class P450 group I signature 64 83 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181253g00032 518 CDD CYP81 68 501 - -
Stsc181253g00032 518 Coils Coil 239 259 - -
Stsc181253g00032 518 PRINTS P450 superfamily signature 365 376 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181253g00032 518 PRINTS P450 superfamily signature 312 329 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181253g00032 518 PRINTS P450 superfamily signature 445 454 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181253g00032 Stsc-Chr181253 214319 217738 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181253g00032 15 517 Cytochrome P450 AT4G37360 45.010 1.50e-156 454
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181253g00032 - - gmx:100794610 689.493