Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181253g00030 ATGGAAGAAGCAGGTTGGGCAATCCTATTTCTCCTCTTGATTCTATTTTTCTTCTTCCTTTCTACCTTGAAGAGAAATAATAACAATTCCAATAAACACAAAAACCTTCCACCTAGTCCAACATCTTTACCATTAATAGGTCACCTTCATCACCTCATAAAAGAACCCCTACACCTTAGTCTCCATAACCTTGTTCAAAACTATGGCCAAATCTTGCTTCTCAAACTTGGCACACGCAATGTCCTTGTTGTCTCTTCACCTTCTGCCGTTGAAGAATGCTTCACAAAGAATGATATCACTTTTGCTAACCGTCCTCGCACACTCGCTGCCAAACACCTCAATTACAACCAAACCACCGTGGGATTCGCCCGCTACGGCGACCATTGGCGCAATCTCAGGCGCCTAACCACCATGGAGTTGTTCTCCACAAACCGGCTTGCAATGTTTGCAAGACTTAGAGAGGAAGAAGTTCAACTCTTGGTCAAACAAATATTTGATGAGTGTTGCATGGGGAAGAAGGAAGGAGCGAAAGTAGAAATCGAGCTGAAAACAAAACTTATTGATTTTTCTTTCAATGTTATGCTGAGGATGATATCTGGGAAGAGGTACTATGGAAAGCATGGAGTGGCTGAAGGAGGGAAAGAGTTTCAGATTCTAATGAGAGAGTTCACCGAGCTTGAAGGGAATGGGAATTTGAATGACTTCTTTCCTGTTCTAAGATGGGTTGATTTTCAGGGCTTGGAAAAGAGAATGATAGAATTGATGAAGAAGATGGACAGGTTCTTGCAGAACCTCCTTGATGAACATAGGACAAACAGGACCTCCATTAACCAAAAAATGAACATGACTTTGATTGATGTCATGTTGCATCTCAGAGAAACTGAACCGGAATTCTATACTGATGACAATATGAAAGGAGTAATGCTGATAATGTTAGTTGCAGGGTCCGAAACATCAGCTATTACAATGGAATGGGCACTATCACTTCTCTTAAACCATCCAGAAGCAATGGTTAAGGTCAGGAATGAGATAGACACCAAGGTAGGAAAAGATCAACTAGTGAAAGAATCAGATCTTGTGAACCTCAAAAACTTGCAAAATGTAATAACCGAGACGCTTCGTTTATACCCTGTGACACCACAACTTCTACCTCATGAATCCTCTTGTGATTGCATAGTTGGTGGATTTCACATACCAAAAGGCACCATGCTACTTGTGAATCTATGGACCCTACACAGGAATGGTGAATTATGGAAAGACCCGACAAGGTTTATGCCAGAGAGGTTTGAAGTAGAAGGTGGAGGTGGTGAAGTGTGCTATAATATGATTCCATTTGGTATTGGAAGAAGAGCATGCCCTGGAGCAGTGTTTGCAAAACGTATCATGGGACATACATTGGGTGCATTGATTCAGTGTTTTGAGTTTGAGAGAGTTGGAAGTGAAGAAATTAATATGAAGGAGGGACTAGGACTTACCATGCCCAGGGTTGAGCCATTGATGGCCTTGTGTAGGACAAGACAAAATATGATTAAGGTTTTGTCTAAGTTATGTGTTAGTGAATAG 1563 0.4133 MEEAGWAILFLLLILFFFFLSTLKRNNNNSNKHKNLPPSPTSLPLIGHLHHLIKEPLHLSLHNLVQNYGQILLLKLGTRNVLVVSSPSAVEECFTKNDITFANRPRTLAAKHLNYNQTTVGFARYGDHWRNLRRLTTMELFSTNRLAMFARLREEEVQLLVKQIFDECCMGKKEGAKVEIELKTKLIDFSFNVMLRMISGKRYYGKHGVAEGGKEFQILMREFTELEGNGNLNDFFPVLRWVDFQGLEKRMIELMKKMDRFLQNLLDEHRTNRTSINQKMNMTLIDVMLHLRETEPEFYTDDNMKGVMLIMLVAGSETSAITMEWALSLLLNHPEAMVKVRNEIDTKVGKDQLVKESDLVNLKNLQNVITETLRLYPVTPQLLPHESSCDCIVGGFHIPKGTMLLVNLWTLHRNGELWKDPTRFMPERFEVEGGGGEVCYNMIPFGIGRRACPGAVFAKRIMGHTLGALIQCFEFERVGSEEINMKEGLGLTMPRVEPLMALCRTRQNMIKVLSKLCVSE 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181253g00030 520 Gene3D Cytochrome P450 26 510 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181253g00030 520 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 445 454 IPR017972 GO:0005506|GO:0016705
Stsc181253g00030 520 PANTHER CYTOCHROME P450 82C3-RELATED 14 507 - -
Stsc181253g00030 520 Coils Coil 244 264 - -
Stsc181253g00030 520 Pfam Cytochrome P450 37 495 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181253g00030 520 FunFam Cytochrome P450 family protein 28 509 - -
Stsc181253g00030 520 SUPERFAMILY Cytochrome P450 37 506 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181253g00030 520 PRINTS P450 superfamily signature 443 452 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181253g00030 520 PRINTS P450 superfamily signature 314 331 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181253g00030 520 PRINTS P450 superfamily signature 367 378 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181253g00030 520 PRINTS E-class P450 group I signature 452 475 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181253g00030 520 PRINTS E-class P450 group I signature 407 431 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181253g00030 520 PRINTS E-class P450 group I signature 442 452 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181253g00030 520 PRINTS E-class P450 group I signature 89 110 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181253g00030 520 PRINTS E-class P450 group I signature 189 207 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181253g00030 520 PRINTS E-class P450 group I signature 323 349 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181253g00030 520 PRINTS E-class P450 group I signature 366 384 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181253g00030 520 PRINTS E-class P450 group I signature 65 84 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181253g00030 520 PRINTS E-class P450 group I signature 303 320 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181253g00030 520 CDD CYP81 69 499 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181253g00030 Stsc-Chr181253 205356 207767 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181253g00030 11 506 Cytochrome P450 AT4G37320 46.906 2.57e-162 468
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181253g00030 - - gmx:100794610 676.011