Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181253g00017 ATGGATCACAGGGTCAACGTTAAAGGCACCATAAGCCTAAAGCCTTTGCATCCGAAGCTATTCTTCACTCAGAACTGCATTGCAAACTTTACAAAGTGCCAAAGTTTGTGGAGGAAGAAAGAAATGGAAGAACAAAAGGAGAATAAAAGTTTTGTAACCATCAACGTGCATGCCGCCAGAGATATGCTTAACTCAGATGGCTACCGCTATCTCGATGTGAGAACTGTTGAGGAATTCAACAAGAGCCATGTTGAGAATGCTCATAATGTTCCGTACATGTTCCTTACAGAACAAGGAAGGGTGAAAAACCCTGATTTTATTGCCCAGGTAGAACCAATATACAATAAGGATGATCACTTAATTGTGGCTTGCAACAGTGGAGGAAGATCATCCCAAGCCAGCATTGACCTGCTTAATTATGGATATAAGCATGTTGTTAACATGGGAGGTGGCTACTCGGCGTGGGTAGATGCTGGTTTTGCTGGGGACAAGCCTGAAGAAGAGCTCAAAACCAGTTGCAAGTTCCGTCCTAAGAAATCTTGA 543 0.4291 MDHRVNVKGTISLKPLHPKLFFTQNCIANFTKCQSLWRKKEMEEQKENKSFVTINVHAARDMLNSDGYRYLDVRTVEEFNKSHVENAHNVPYMFLTEQGRVKNPDFIAQVEPIYNKDDHLIVACNSGGRSSQASIDLLNYGYKHVVNMGGGYSAWVDAGFAGDKPEEELKTSCKFRPKKS 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181253g00017 180 Gene3D - 36 161 IPR036873 -
Stsc181253g00017 180 ProSiteProfiles Rhodanese domain profile. 64 164 IPR001763 -
Stsc181253g00017 180 Pfam Rhodanese-like domain 59 157 IPR001763 -
Stsc181253g00017 180 CDD RHOD 59 156 - -
Stsc181253g00017 180 SMART rhod_4 54 161 IPR001763 -
Stsc181253g00017 180 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 50 160 IPR036873 -
Stsc181253g00017 180 PANTHER THIOSULFATE SULFURTRANSFERASE 18 25 166 IPR044684 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181253g00017 Stsc-Chr181253 76704 77820 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181253g00017 51 168 Sulfurtransferasese or Rhodanese AT5G66170 48.333 1.51e-34 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181253g00017 K22547 - gmx:100794624 220.32